To cite SpotClean in publications, please use:

Ni, Z., Prasad, A., Chen, S. et al. SpotClean adjusts for spot swapping in spatial transcriptomics data. Nat Commun 13, 2971 (2022).

Corresponding BibTeX entry:

  @Article{,
    author = {Zijian Ni and Aman Prasad and Shuyang Chen and Richard B.
      Halberg and Lisa M. Arkin and Beth A. Drolet and Michael A.
      Newton and Christina Kendziorski},
    title = {SpotClean adjusts for spot swapping in spatial
      transcriptomics data},
    journal = {Nature Communications},
    year = {2022},
    doi = {https://doi.org/10.1038/s41467-022-30587-y},
  }