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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "SplicingFactory" in publications use:'
type: software
license: GPL-3.0-only
title: 'SplicingFactory: Splicing Diversity Analysis for Transcriptome Data'
version: 1.13.0
doi: 10.1093/bioinformatics/btab648
identifiers:
- type: doi
  value: 10.32614/CRAN.package.SplicingFactory
abstract: The SplicingFactory R package uses transcript-level expression values to
  analyze splicing diversity based on various statistical measures, like Shannon entropy
  or the Gini index. These measures can quantify transcript isoform diversity within
  samples or between conditions. Additionally, the package analyzes the isoform diversity
  data, looking for significant changes between conditions.
authors:
- family-names: Szikora
  given-names: Peter A.
  email: peter.andras.szikora@gmail.com
- family-names: Por
  given-names: Tamas
  email: tomasz.por@gmail.com
- family-names: Sebestyen
  given-names: Endre
  email: endre.sebestyen@gmail.com
  orcid: https://orcid.org/0000-0001-5470-2161
preferred-citation:
  type: article
  title: SplicingFactory – Splicing diversity analysis for transcriptome data
  authors:
  - family-names: Dankó
    given-names: Benedek
  - family-names: Szikora
    given-names: Péter
  - family-names: Pór
    given-names: Tamás
  - family-names: Szeifert
    given-names: Alexa
  - family-names: Sebestyén
    given-names: Endre
  journal: Bioinformatics
  volume: '38'
  issue: '2'
  year: '2022'
  doi: 10.1093/bioinformatics/btab648
  url: https://doi.org/10.1093/bioinformatics/btab648
  start: 384-390
repository: https://bioc.r-universe.dev
repository-code: https://github.com/esebesty/SplicingFactory
commit: cb30fa4b706b2c62ff13b6e8d50b27e35869d52a
url: https://github.com/esebesty/SplicingFactory
contact:
- family-names: Sebestyen
  given-names: Endre
  email: endre.sebestyen@gmail.com
  orcid: https://orcid.org/0000-0001-5470-2161