# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "SpectriPy" in publications use:'
type: software
license: Artistic-2.0
title: 'SpectriPy: Enhancing Cross-Language Mass Spectrometry Data Analysis with R
  and Python'
version: 1.3.0
doi: 10.21105/joss.08070
identifiers:
- type: doi
  value: 10.32614/CRAN.package.SpectriPy
abstract: The SpectriPy package allows integration of Python-based MS analysis code
  with the Spectra package. Spectra objects can be converted into Python MS data structures.
  In addition, SpectriPy integrates and wraps the similarity scoring and processing/filtering
  functions from the Python matchms package into R.
authors:
- family-names: Witting
  given-names: Michael
  email: michael.witting@helmholtz-muenchen.de
  orcid: https://orcid.org/0000-0002-1462-4426
- family-names: Rainer
  given-names: Johannes
  email: Johannes.Rainer@eurac.edu
  orcid: https://orcid.org/0000-0002-6977-7147
- family-names: Huber
  given-names: Carolin
  email: Carolin-elisabeth.huber@ufz.de
  orcid: https://orcid.org/0000-0002-9355-8948
- family-names: De Graeve
  given-names: Marilyn
  email: marilyn.degraeve@eurac.edu
  orcid: https://orcid.org/0000-0001-6916-401X
- family-names: Bittremieux
  given-names: Wout
  email: wout.bittremieux@uantwerpen.be
  orcid: https://orcid.org/0000-0002-3105-1359
- family-names: Naake
  given-names: Thomas
  email: thomasnaake@googlemail.com
  orcid: https://orcid.org/0000-0001-7917-5580
preferred-citation:
  type: article
  title: A universal language for finding mass spectrometry data patterns
  authors:
  - family-names: De Graeve
    given-names: Marilyn
    email: marilyn.degraeve@eurac.edu
    orcid: https://orcid.org/0000-0001-6916-401X
  - family-names: Bittremieux
    given-names: Wout
    email: wout.bittremieux@uantwerpen.be
    orcid: https://orcid.org/0000-0002-3105-1359
  - family-names: Naake
    given-names: Thomas
    email: thomasnaake@googlemail.com
    orcid: https://orcid.org/0000-0001-7917-5580
  - family-names: Huber
    given-names: Carolin
    email: Carolin-elisabeth.huber@ufz.de
    orcid: https://orcid.org/0000-0002-9355-8948
  - family-names: Anagho-Mattanovich
    given-names: Matthias
  - family-names: Hoffmann
    given-names: Nils
  - family-names: Marchal
    given-names: Pierre
  - family-names: Chrone
    given-names: Victor
  - family-names: Louail
    given-names: Philippine
  - family-names: Hecht
    given-names: Helge
  - family-names: Witting
    given-names: Michael
    email: michael.witting@helmholtz-muenchen.de
    orcid: https://orcid.org/0000-0002-1462-4426
  - family-names: Rainer
    given-names: Johannes
    email: Johannes.Rainer@eurac.edu
    orcid: https://orcid.org/0000-0002-6977-7147
  journal: Journal of Open Source Software
  year: '2025'
  volume: '10'
  issue: '109'
  url: https://joss.theoj.org/papers/10.21105/joss.08070
  doi: 10.21105/joss.08070
  start: '8070'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/RforMassSpectrometry/SpectriPy
commit: c61370bce46b19ef871bb040e12bc2fc62a8027e
url: https://github.com/RforMassSpectrometry/SpectriPy
date-released: '2026-04-28'
contact:
- family-names: Rainer
  given-names: Johannes
  email: Johannes.Rainer@eurac.edu
  orcid: https://orcid.org/0000-0002-6977-7147