# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "SpatialFeatureExperiment" in publications use:'
type: software
license: Artistic-2.0
title: 'SpatialFeatureExperiment: Integrating SpatialExperiment with Simple Features
  in sf'
version: 1.7.1
doi: 10.1101/2023.07.20.549945
abstract: A new S4 class integrating Simple Features with the R package sf to bring
  geospatial data analysis methods based on vector data to spatial transcriptomics.
  Also implements management of spatial neighborhood graphs and geometric operations.
  This pakage builds upon SpatialExperiment and SingleCellExperiment, hence methods
  for these parent classes can still be used.
authors:
- family-names: Moses
  given-names: Lambda
  email: dlu2@caltech.edu
  orcid: https://orcid.org/0000-0002-7092-9427
- family-names: Huseynov
  given-names: Alik
  orcid: https://orcid.org/0000-0002-1438-4389
- family-names: Pachter
  given-names: Lior
  email: lpachter@caltech.edu
  orcid: https://orcid.org/0000-0002-9164-6231
preferred-citation:
  type: article
  title: 'Voyager: exploratory single-cell genomics data analysis with geospatial
    statistics'
  authors:
  - family-names: Moses
    given-names: Lambda
    email: dlu2@caltech.edu
    orcid: https://orcid.org/0000-0002-7092-9427
  - family-names: Einarsson
    given-names: Pétur Helgi
    orcid: https://orcid.org/0000-0002-1665-7459
  - family-names: Jackson
    given-names: Kayla
    email: kaylajac@caltech.edu
    orcid: https://orcid.org/0000-0001-6483-0108
  - family-names: Luebbert
    given-names: Laura
    email: lauraluebbert@caltech.edu
    orcid: https://orcid.org/0000-0003-1379-2927
  - family-names: Booeshaghi
    given-names: Sina
    email: sbooeshaghi@gmail.com
    orcid: https://orcid.org/0000-0002-6442-4502
  - family-names: Antonsson
    given-names: Sindri
    orcid: https://orcid.org/0009-0005-0779-6923
  - family-names: Melsted
    given-names: Páll
    orcid: https://orcid.org/0000-0002-8418-6724
  - family-names: Pachter
    given-names: Lior
    email: lpachter@caltech.edu
    orcid: https://orcid.org/0000-0002-9164-6231
  journal: bioRxiv
  year: '2023'
  doi: 10.1101/2023.07.20.549945
repository: https://bioc.r-universe.dev
repository-code: https://github.com/pachterlab/SpatialFeatureExperiment
url: https://github.com/pachterlab/SpatialFeatureExperiment
contact:
- family-names: Moses
  given-names: Lambda
  email: dlu2@caltech.edu
  orcid: https://orcid.org/0000-0002-7092-9427