Package: SpatialExperimentIO
Title: Read in Xenium, CosMx, MERSCOPE or STARmapPLUS data as
        SpatialExperiment object
Version: 1.5.0
Authors@R: c(
    person("Yixing E.", "Dong", 
        email = "estelladong729@gmail.com", 
        role = c("aut", "cre"), 
        comment = c(ORCID = "0009-0003-5115-5686")))
URL: https://github.com/estellad/SpatialExperimentIO
BugReports: https://github.com/estellad/SpatialExperimentIO/issues
Description: Read in imaging-based spatial transcriptomics technology
        data. Current available modules are for Xenium by 10X Genomics,
        CosMx by Nanostring, MERSCOPE by Vizgen, or STARmapPLUS from
        Broad Institute. You can choose to read the data in as a
        SpatialExperiment or a SingleCellExperiment object.
License: Artistic-2.0
Encoding: UTF-8
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)
Imports: DropletUtils, SpatialExperiment, SingleCellExperiment,
        methods, data.table, arrow, purrr, S4Vectors
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), BiocStyle
biocViews: DataRepresentation, DataImport, Infrastructure,
        Transcriptomics, SingleCell, Spatial, GeneExpression
RoxygenNote: 7.3.2
Config/testthat/edition: 3
Config/pak/sysreqs: cmake libmagick++-dev gsfonts libicu-dev libssl-dev
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 13:04:18 UTC
RemoteUrl: https://github.com/bioc/SpatialExperimentIO
RemoteRef: HEAD
RemoteSha: 56f593fd6df67215b6250df3298befb8528d4245
NeedsCompilation: no
Packaged: 2026-06-08 07:04:34 UTC; root
Author: Yixing E. Dong [aut, cre] (ORCID:
    <https://orcid.org/0009-0003-5115-5686>)
Maintainer: Yixing E. Dong <estelladong729@gmail.com>
Depends: R (>= 4.1.0)