# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "SingleCellExperiment" in publications use:'
type: software
license: GPL-3.0-only
title: 'SingleCellExperiment: S4 Classes for Single Cell Data'
version: 1.27.2
identifiers:
- type: doi
  value: 10.32614/CRAN.package.SingleCellExperiment
abstract: Defines a S4 class for storing data from single-cell experiments. This includes
  specialized methods to store and retrieve spike-in information, dimensionality reduction
  coordinates and size factors for each cell, along with the usual metadata for genes
  and libraries.
authors:
- family-names: Lun
  given-names: Aaron
  email: infinite.monkeys.with.keyboards@gmail.com
- family-names: Risso
  given-names: Davide
  email: risso.davide@gmail.com
preferred-citation:
  type: article
  title: Orchestrating single-cell analysis with Bioconductor
  authors:
  - family-names: Amezquita
    given-names: Robert
  - family-names: Lun
    given-names: Aaron
    email: infinite.monkeys.with.keyboards@gmail.com
  - family-names: Becht
    given-names: Etienne
  - family-names: Carey
    given-names: Vince
  - family-names: Carpp
    given-names: Lindsay
  - family-names: Geistlinger
    given-names: Ludwig
  - family-names: Marini
    given-names: Federico
  - family-names: Rue-Albrecht
    given-names: Kevin
  - family-names: Risso
    given-names: Davide
    email: risso.davide@gmail.com
  - family-names: Soneson
    given-names: Charlotte
  - family-names: Waldron
    given-names: Levi
  - family-names: Pages
    given-names: Herve
  - family-names: Smith
    given-names: Mike
  - family-names: Huber
    given-names: Wolfgang
  - family-names: Morgan
    given-names: Martin
  - family-names: Gottardo
    given-names: Raphael
  - family-names: Hicks
    given-names: Stephanie
  year: '2020'
  volume: '17'
  journal: Nature Methods
  url: https://www.nature.com/articles/s41592-019-0654-x
  start: '137'
  end: '145'
repository: https://bioc.r-universe.dev
commit: 7c68b56da72642909bd2f11fd28338f249ba807b
date-released: '2024-05-21'
contact:
- family-names: Risso
  given-names: Davide
  email: risso.davide@gmail.com