Package: SimiCviz
Type: Package
Title: Visualization Tools for Gene Regulatory Network Analysis
Version: 0.99.2
Authors@R: 
    person(given = "Irene",
           family = "Marín-Goñi",
           role = c("aut", "cre"),
           email = "imarin.4@alumni.unav.es",
           comment=c(ORCID="0000-0002-5060-0712"))
Description: Visualization and export utilities for SimiC and
        SimiCPipeline outputs. The package focuses on importing
        SimiC-style results (e.g., weights, AUC metrics) from
        pickle/CSV files, processing and generating publication-ready
        plots (networks, heatmaps, distributions) and tables saved into
        a reproducible, ordered directory hierarchy.
License: MIT + file LICENSE
Encoding: UTF-8
SystemRequirements: Python (>= 3.8)
Depends: R (>= 4.5)
Imports: methods, stats, BiocParallel, viridisLite, utils, Matrix,
        graphics, SummarizedExperiment, colorspace, gridExtra, ggplot2,
        dplyr, tibble, tidyr, reshape2, scales, reticulate (>= 1.45.0)
Suggests: knitr, rmarkdown, BiocStyle, testthat (>= 3.0.0)
VignetteBuilder: knitr
URL: https://github.com/ML4BM-Lab/SimiCviz
BugReports: https://github.com/ML4BM-Lab/SimiCviz/issues
biocViews: Software, Visualization, GeneRegulation, NetworkInference,
        Network, SingleCell
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Config/pak/sysreqs: libicu-dev libpng-dev python3 zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-07-04 19:41:13 UTC
RemoteUrl: https://github.com/bioc/SimiCviz
RemoteRef: HEAD
RemoteSha: ba290d224a7f119cc206b2137774077df41d4073
NeedsCompilation: no
Packaged: 2026-10-04 09:50:50 UTC; root
Author: Irene Marín-Goñi [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-5060-0712>)
Maintainer: Irene Marín-Goñi <imarin.4@alumni.unav.es>