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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "SimFFPE" in publications use:'
type: software
license: LGPL-3.0-only
title: 'SimFFPE: NGS Read Simulator for FFPE Tissue'
version: 1.17.0
abstract: The NGS (Next-Generation Sequencing) reads from FFPE (Formalin-Fixed Paraffin-Embedded)
  samples contain numerous artifact chimeric reads (ACRS), which can lead to false
  positive structural variant calls. These ACRs are derived from the combination of
  two single-stranded DNA (ss-DNA) fragments with short reverse complementary regions
  (SRCRs). This package simulates these artifact chimeric reads as well as normal
  reads for FFPE samples on the whole genome / several chromosomes / large regions.
authors:
- family-names: Wei
  given-names: Lanying
  email: lanying.wei@uni-muenster.de
  orcid: https://orcid.org/0000-0002-4281-8017
repository: https://bioc.r-universe.dev
contact:
- family-names: Wei
  given-names: Lanying
  email: lanying.wei@uni-muenster.de
  orcid: https://orcid.org/0000-0002-4281-8017