NEWS

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SeqGSEA 1.31.1 (2020-11-30)

• Depends on DESeq2 (previously DESeq)

SeqGSEA 1.1.5 (2013-09-01)

• Added an all-in function runSeqGSEA() for one step analysis
• Modified genpermuteMat() with invoking set.seed() for reproducibility
• Vignette updated

SeqGSEA 1.1.4 (2013-08-10)

• Updated functions to allow DE-only GSEA analysis.
• Fixed a few bugs.
• Vignette updated.

SeqGSEA 1.1.3 (2013-06-13)

• Sorted out an error due to biomaRt update (thanks to Martin Morgan).

SeqGSEA 1.1.2 (2013-05-01)

• Updated vignette.

SeqGSEA 1.1.1 (2013-04-23)

• The methodology paper of the SeqGSEA package published at BMC Bioinformatics (2013, 14(Suppl 5):S16).
• Added a function writeScores to generate DE/DS and gene scores output.

SeqGSEA 1.0.0 (2013-04-04)

• SeqGSEA's first release with Bioconductor 2.12.