Changes in version 1.21.11 (2015-03-22) o Fixed a bug with listSRAfile function. Changes in version 1.21.8 (2014-12-12) o Added fastq table to the database o Re-wrote getFastqInfo function o Fastq files can be downloaded by getFastqFile or getSRAfile o Added to the fastq ftp addresses for SRR accessions over SRR999999 Changes in version 1.5.1 (2011-01-06) o Removed functions of listFastq, getFastqInfo, getFastq o Added listSRAfile function o Added getSRAinfo function o Added getSRAfile function Changes in version 1.5.0 (2010-10-18) o Added IGVsession function Changes in version 1.3.2 (2010-09-07) o Added IGVsort function o Added IGVcollapse function o Added function to check fastq file type inside of listFastq Changes in version 1.3.1 (2010-04-23) o Added IGVsession function o Moved IGVsnapshotDirectory functionality into IGVsnapshot o Removed IGVsnapshotDirectory o Modified all corresponding help pages Changes in version 1.3.0 (2010-04-22) o New version for bioc-dev 2.7 Changes in version 1.1.12 (2010-04-12) o Now using socket connections for interacting with IGV o load2IGV and load2newIGV retired o IGVload, IGVgenome, IGVgoto, and IGVsnapshot introduced as replacements for the single load2... commands Changes in version 1.1.11 (2010-04-10) o Use 'TRUE' rather than 'T' o Format SQL consistently as SELECT * FROM table, etc. o Avoid long lines in code o Use message() rather than print() or cat() to communicate with user o Expose 'method' argument of download.file Changes in version 1.1.10 (2010-03-21) o Fixed some bugs Changes in version 1.1.9 (2010-03-20) o Change argument of destdir in getFastq to be required o Fixed some bugs o Imporoved help contents Changes in version 1.1.8 (2010-03-17) o Made various changes according to the reviewer's comments o More examples executable o Fixed some bugs o Added more help contents Changes in version 1.1.7 (2010-03-16) o Added function entityGraph o Added function sraGraph o Modified related help pages Changes in version 1.1.6 (2010-03-13) o New package