NEWS

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SRAdb 1.21.11 (2015-03-22)

• Fixed a bug with listSRAfile function.

SRAdb 1.21.8 (2014-12-12)

• Added fastq table to the database
• Re-wrote getFastqInfo function
• Fastq files can be downloaded by getFastqFile or getSRAfile
• Added dir2 to the fastq ftp addresses for SRR accessions over SRR999999

SRAdb 1.5.1 (2011-01-06)

• Removed functions of listFastq, getFastqInfo, getFastq
• Added listSRAfile function
• Added getSRAinfo function
• Added getSRAfile function

SRAdb 1.5.0 (2010-10-18)

• Added IGVsession function

SRAdb 1.3.2 (2010-09-07)

• Added IGVsort function
• Added IGVcollapse function
• Added function to check fastq file type inside of listFastq

SRAdb 1.3.1 (2010-04-23)

• Added IGVsession function
• Moved IGVsnapshotDirectory functionality into IGVsnapshot
• Removed IGVsnapshotDirectory
• Modified all corresponding help pages

SRAdb 1.3.0 (2010-04-22)

• New version for bioc-dev 2.7

SRAdb 1.1.12 (2010-04-12)

• Now using socket connections for interacting with IGV
• load2IGV and load2newIGV retired
• IGVload, IGVgenome, IGVgoto, and IGVsnapshot introduced as replacements for the single load2... commands

SRAdb 1.1.11 (2010-04-10)

• Use 'TRUE' rather than 'T'
• Format SQL consistently as SELECT * FROM table, etc.
• Avoid long lines in code
• Use message() rather than print() or cat() to communicate with user
• Expose 'method' argument of download.file

SRAdb 1.1.10 (2010-03-21)

• Fixed some bugs

SRAdb 1.1.9 (2010-03-20)

• Change argument of destdir in getFastq to be required
• Fixed some bugs
• Imporoved help contents

SRAdb 1.1.8 (2010-03-17)

• Made various changes according to the reviewer's comments
• More examples executable
• Fixed some bugs
• Added more help contents

SRAdb 1.1.7 (2010-03-16)

• Added function entityGraph
• Added function sraGraph
• Modified related help pages

SRAdb 1.1.6 (2010-03-13)

• New package