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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "SPsimSeq" in publications use:'
type: software
license: GPL-2.0-only
title: 'SPsimSeq: Semi-parametric simulation tool for bulk and single-cell RNA sequencing
  data'
version: 1.15.0
abstract: SPsimSeq uses a specially designed exponential family for density estimation
  to constructs the distribution of gene expression levels from a given real RNA sequencing
  data (single-cell or bulk), and subsequently simulates a new dataset from the estimated
  marginal distributions using Gaussian-copulas to retain the dependence between genes.
  It allows simulation of multiple groups and batches with any required sample size
  and library size.
authors:
- family-names: Assefa
  given-names: Alemu Takele
  email: alemutak@hotmail.com
- family-names: Meys
  given-names: Joris
  email: Joris.Meys@ugent.be
- family-names: Hawinkel
  given-names: Stijn
  email: stijnhawinkel@hotmail.com
preferred-citation:
  type: manual
  title: 'SPsimSeq: Semi-parametric simulation tool for bulk and single-cell RNA sequencing
    data'
  authors:
  - family-names: Assefa
    given-names: Alemu Takele
    email: alemutak@hotmail.com
  - family-names: Hawinkel
    given-names: Stijn
    email: stijnhawinkel@hotmail.com
  - family-names: Vandesompele
    given-names: Jo
  - family-names: Thas
    given-names: Olivier
  - name: R Core Team
  notes: R package version 1.15.0
repository: https://bioc.r-universe.dev
repository-code: https://github.com/CenterForStatistics-UGent/SPsimSeq
url: https://github.com/CenterForStatistics-UGent/SPsimSeq
contact:
- family-names: Meys
  given-names: Joris
  email: Joris.Meys@ugent.be