To cite SAIGEgds in publications use:

  Zheng X, Davis J.Wade. SAIGEgds -- an efficient statistical tool for
  large-scale PheWAS with mixed models. Bioinformatics 2021. doi:
  10.1093/bioinformatics/btaa731

A BibTeX entry for LaTeX users is

  @Misc{,
    title = {SAIGEgds -- an efficient statistical tool for large-scale PheWAS with mixed models},
    author = {Xiuwen Zheng and J. Wade Davis},
    journal = {Bioinformatics},
    year = {2021},
    doi = {10.1093/bioinformatics/btaa731},
  }

  Zhou W, Nielsen JB, Fritsche LG, Dey R, Gabrielsen ME, Wolford BN,
  LeFaive J, VandeHaar P, Gagliano SA, Gifford A, Bastarache LA, Wei
  WQ, Denny JC, Lin M, Hveem K, Kang HM, Abecasis GR, Willer CJ, Lee S.
  Efficiently controlling for case-control imbalance and sample
  relatedness in large-scale genetic association studies. Nature
  Genetics 2018. Sep;50(9):1335-1341. doi: 10.1038/s41588-018-0184-y

A BibTeX entry for LaTeX users is

  @Article{,
    title = {Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies},
    author = {Wei Zhou and Jonas B. Nielsen and Lars G. Fritsche and Rounak Dey and Maiken E. Gabrielsen and Brooke N. Wolford and Jonathon LeFaive and Peter VandeHaar and Sarah A. Gagliano and Aliya Gifford and Lisa A. Bastarache and Wei-Qi Wei and Joshua C. Denny and Maoxuan Lin and Kristian Hveem and Hyun Min Kang and Goncalo R. Abecasis and Cristen J. Willer and Seunggeun Lee},
    journal = {Nature Genetics},
    year = {2018},
    doi = {10.1038/s41588-018-0184-y},
  }

  Xiuwen Zheng, Stephanie M. Gogarten, Michael Lawrence, Adrienne
  Stilp, Matthew P. Conomos, Bruce S. Weir, Cathy Laurie, David Levine.
  SeqArray -- A storage-efficient high-performance data format for WGS
  variant calls. Bioinformatics 2017; doi:
  10.1093/bioinformatics/btx145

A BibTeX entry for LaTeX users is

  @Article{,
    title = {SeqArray -- A storage-efficient high-performance data format for WGS variant calls},
    author = {Xiuwen Zheng and Stephanie Gogarten and Michael Lawrence and Adrienne Stilp and Matthew Conomos and Bruce Weir and Cathy Laurie and David Levine},
    journal = {Bioinformatics},
    year = {2017},
    doi = {10.1093/bioinformatics/btx145},
  }