Changes in version 0.99.3                        

  - Minor vignette updates.

                       Changes in version 0.99.2                        

  - Respect the registered BiocParallel backend and prefix result
    columns with RhyME_ to preserve existing row annotations.
  - Add unit tests for automatic EB estimation, p-value separation, BH
    adjustment, and phase recovery.
  - Update the vignette with rhythmic and non-rhythmic examples,
    evaluated automatic EB fits, MetaCycle comparisons, and methylation
    array input.
  - Add real methylation CSV data and demonstrate constructing a
    SummarizedExperiment from beta values and sample metadata.
  - Declare MetaCycle and minfi in Suggests, and bundle the parameters
    and sampling design needed to regenerate the example data.
  - Use Bioconductor installation instructions in the README.

                       Changes in version 0.99.1                        

  - Replace TMB-based fitting with penalized quasi-likelihood (PQL),
    using a null-model score test for rhythmicity and a separate
    full-model fit for rhythm parameters.

                       Changes in version 0.99.0                        

  - Initial submission with TMB-based beta cosinor models, optional
    subject random intercepts, and empirical Bayes precision shrinkage.