Package: ReportingTools Title: Tools for making reports in various formats Version: 2.53.0 Author: Jason A. Hackney, Melanie Huntley, Jessica L. Larson, Christina Chaivorapol, Gabriel Becker, and Josh Kaminker Maintainer: Jason A. Hackney , Gabriel Becker , Jessica L. Larson Depends: methods, knitr, utils Imports: Biobase,hwriter,Category,GOstats,limma(>= 3.17.5),lattice,AnnotationDbi,edgeR, annotate,PFAM.db, GSEABase, BiocGenerics(>= 0.1.6), grid, XML, R.utils, DESeq2(>= 1.3.41), ggplot2, ggbio, IRanges Suggests: RUnit, ALL, hgu95av2.db, org.Mm.eg.db, shiny, pasilla, org.Sc.sgd.db, rmarkdown, markdown Type: Package LazyLoad: yes License: Artistic-2.0 Description: The ReportingTools software package enables users to easily display reports of analysis results generated from sources such as microarray and sequencing data. The package allows users to create HTML pages that may be viewed on a web browser such as Safari, or in other formats readable by programs such as Excel. Users can generate tables with sortable and filterable columns, make and display plots, and link table entries to other data sources such as NCBI or larger plots within the HTML page. Using the package, users can also produce a table of contents page to link various reports together for a particular project that can be viewed in a web browser. For more examples, please visit our site: http:// research-pub.gene.com/ReportingTools. ByteCompile: TRUE VignetteBuilder: utils, rmarkdown biocViews: ImmunoOncology, Software, Visualization, Microarray, RNASeq, GO, DataRepresentation, GeneSetEnrichment Config/pak/sysreqs: cmake make libbz2-dev libicu-dev liblzma-dev libpng-dev libuv1-dev libxml2-dev libssl-dev xz-utils zlib1g-dev Repository: https://bioc.r-universe.dev Date/Publication: 2026-04-28 12:36:54 UTC RemoteUrl: https://github.com/bioc/ReportingTools RemoteRef: HEAD RemoteSha: fe3989bf31b879005ccd9ef359d4d2dab6aac78f NeedsCompilation: no Packaged: 2026-07-04 14:45:35 UTC; root