Package: ReactomePA
Type: Package
Title: Reactome Pathway Analysis
Version: 1.57.0
Authors@R: c(person(given = "Guangchuang", family = "Yu",
	   	    email = "guangchuangyu@gmail.com",
		    role  = c("aut", "cre")),
	     person(given = "Vladislav", family = "Petyuk",
	     	    email = "petyuk@gmail.com",
		    role  = "ctb"))
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Description: This package provides functions for pathway analysis based
        on REACTOME pathway database. It implements enrichment
        analysis, gene set enrichment analysis and several functions
        for visualization. This package is not affiliated with the
        Reactome team.
Depends: R (>= 3.4.0)
Imports: AnnotationDbi, enrichplot, enrichit, ggplot2 (>= 3.3.5),
        ggraph, reactome.db, igraph, graphite, gson, yulab.utils (>=
        0.1.5)
Suggests: clusterProfiler, knitr, rmarkdown, org.Hs.eg.db, prettydoc,
        testthat
VignetteBuilder: knitr
ByteCompile: true
License: GPL-2
URL: https://yulab-smu.top/contribution-knowledge-mining/
BugReports: https://github.com/GuangchuangYu/ReactomePA/issues
Packaged: 2026-05-30 09:37:22 UTC; root
biocViews: Pathways, Visualization, Annotation, MultipleComparison,
        GeneSetEnrichment, Reactome
RoxygenNote: 7.3.3
Encoding: UTF-8
Config/pak/sysreqs: libcairo2-dev cmake libfontconfig1-dev
        libfreetype6-dev libglpk-dev make libicu-dev libpng-dev
        libuv1-dev libxml2-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:36:22 UTC
RemoteUrl: https://github.com/bioc/ReactomePA
RemoteRef: HEAD
RemoteSha: d04e108b02a83c8504acd198478f54b303b20cc6
NeedsCompilation: no
Author: Guangchuang Yu [aut, cre],
  Vladislav Petyuk [ctb]