Package: Rcwl
Title: An R interface to the Common Workflow Language
Version: 1.29.0
Authors@R: c(person("Qiang", "Hu", email = "qiang.hu@roswellpark.org", role = c("aut", "cre")),
	     person("Qian", "Liu", email = "qian.liu@roswellpark.org", role = c("aut")))
Description: The Common Workflow Language (CWL) is an open standard for
        development of data analysis workflows that is portable and
        scalable across different tools and working environments. Rcwl
        provides a simple way to wrap command line tools and build CWL
        data analysis pipelines programmatically within R. It increases
        the ease of usage, development, and maintenance of CWL
        pipelines.
Depends: R (>= 3.6), yaml, methods, S4Vectors
Imports: utils, stats, BiocParallel, batchtools, DiagrammeR, shiny,
        R.utils, codetools, basilisk
License: GPL-2 | file LICENSE
Encoding: UTF-8
Suggests: testthat, knitr, rmarkdown, BiocStyle
VignetteBuilder: knitr
RoxygenNote: 7.3.1
biocViews: Software, WorkflowStep, ImmunoOncology
StagedInstall: no
Config/Bioconductor/UnsupportedPlatforms: windows
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libpng-dev
        libuv1-dev libxml2-dev python3 libx11-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:49:33 UTC
RemoteUrl: https://github.com/bioc/Rcwl
RemoteRef: HEAD
RemoteSha: 923729b75bf78b4cab5bcc149afe4e7cb2c4c4f4
NeedsCompilation: no
Packaged: 2026-07-03 11:35:41 UTC; root
Author: Qiang Hu [aut, cre],
  Qian Liu [aut]
Maintainer: Qiang Hu <qiang.hu@roswellpark.org>