# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "RadioGx" in publications use:'
type: software
license: GPL-3.0-only
title: 'RadioGx: Analysis of Large-Scale Radio-Genomic Data'
version: 2.17.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.RadioGx
abstract: 'Computational tool box for radio-genomic analysis which integrates radio-response
  data, radio-biological modelling and comprehensive cell line annotations for hundreds
  of cancer cell lines. The ''RadioSet'' class enables creation and manipulation of
  standardized datasets including information about cancer cells lines, radio-response
  assays and dose-response indicators. Included methods allow fitting and plotting
  dose-response data using established radio-biological models along with quality
  control to validate results. Additional functions related to fitting and plotting
  dose response curves, quantifying statistical correlation and calculating area under
  the curve (AUC) or survival fraction (SF) are included. For more details please
  see the included documentation, references, as well as: Manem, V. et al (2018) <https://doi.org/10.1101/449793>.'
authors:
- family-names: Manem
  given-names: Venkata
  email: mail2mvskumar@gmail.com
- family-names: Smirnov
  given-names: Petr
  email: petr.smirnov@uhnresearch.ca
- family-names: Smith
  given-names: Ian
  email: ianc.smith@mail.utoronto.ca
- family-names: Lambie
  given-names: Meghan
  email: megan.lambie@mail.utoronto.ca
- family-names: Eeles
  given-names: Christopher
  email: christopher.eeles@uhnresearch.ca
- family-names: Bratman
  given-names: Scott
  email: scott.bratman@rmp.uhn.ca
- family-names: Joseph
  given-names: Jermiah
  email: jermiah.joseph@uhn.ca
- family-names: Haibe-Kains
  given-names: Benjamin
  email: benjamin.haibe.kains@utoronto.ca
preferred-citation:
  type: article
  title: Modeling cellular response in large-scale radiogenomic databases to advance
    precision radiotherapy
  authors:
  - name: Manem
  - name: V.
  - name: Labie
  - name: M.
  - name: Smirnov
  - name: P.
  - name: Kofia
  - name: Freeman
  - name: Koritzinksy
  - name: Abazeed
  - name: Haibe-Kains
  - name: B.
  - name: Bratman
  - name: S.
  journal: bioRxiv
  year: '2018'
repository: https://bioc.r-universe.dev
commit: 238a2e31cef8465cd3389f3f09b4f1ec857149bd
date-released: '2023-04-19'
contact:
- family-names: Haibe-Kains
  given-names: Benjamin
  email: benjamin.haibe.kains@utoronto.ca
references:
- type: article
  title: 'PharmacoGx: an R package for analysis of large pharmacogenomic datasets'
  authors:
  - family-names: Smirnov
    given-names: P
  - family-names: Safikhani
    given-names: Z
  - family-names: El-Hachem
    given-names: 'N'
  - family-names: Wang
    given-names: D
  - family-names: She
    given-names: A
  - family-names: Olsen
    given-names: C
  - family-names: Freeman
    given-names: M
  - family-names: Selby
    given-names: H
  - family-names: Gendoo
    given-names: D
  - family-names: Grossman
    given-names: P
  - family-names: Beck
    given-names: A
  - family-names: Aerts
    given-names: H
  - family-names: Lupien
    given-names: M
  - family-names: Haibe-Kains
    given-names: A Goldenberg ,B
  journal: Bioinformatics (Oxford, England)
  year: '2016'