Regular maintenance, stable release.
Regular maintenance, stable release.
Regular maintenance, stable release.
Regular maintenance, stable release.
Regular maintenance, stable release.
Regular maintenance, stable release.
Regular maintenance, stable release.
Regular maintenance, stable release.
Make available GSEA-2T and aREA-3T algorithms for single-sample analysis.
Improved RTN workflows.
Improved annotation slots for TNA/TNI classes.
Concluded the VSE/EVSE pipeline, including examples.
Improved computational performance and RTN workflows.
In order to improve stability and portability, all dependencies have been extensively revised and, when available, replaced with more stable options.
In order to simplify documentation and usability, some pipelines have been revised and should be distributed as separated packages, or 'on demand', focused on the main workflow, as for example the new 'RTNduals' package.
Improved computational performance and RTN workflows.
Introduced partial correlation metric to derive regulons.
Improved computational performance and RTN workflows.
Improved computational performance and RTN workflows.
Improved computational performance for permutation analysis and other parallel processing pipelines.
Fix a phyper function issue.
Introduced 2-tailed GSEA and other related methods.
Introduced variant set enrichment analysis for regulons.
1st Bioconductor release of RTN [2013-10-15].