Package: RCy3
Type: Package
Title: Functions to Access and Control Cytoscape
Version: 2.33.0
Date: 2025-12-02
Authors@R: c(person("Jing", "Chen", role = "cre",
                     email = "jingjingbic@gmail.com"),
             person("Alex", "Pico", role = "aut",
                     email = "alex.pico@gladstone.ucsf.edu",
                     comment = c(ORCID = "0000-0001-5706-2163")),
             person("Tanja", "Muetze", role = "aut",
                     email = "tanja.muetze14@alumni.imperial.ac.uk"),
             person("Paul", "Shannon", role = "aut",
                     email = "pshannon@systemsbiology.org"),
             person("Ruth", "Isserlin", role = "ctb"),
             person("Shraddha", "Pai", role = "ctb"),
             person("Julia", "Gustavsen", role = "ctb"),
             person("Georgi", "Kolishovski", role = "ctb"),
             person("Yihang", "Xin", role = "ctb",
                     email = "xinsg0@gmail.com")
          )
Imports: httr, methods, RJSONIO, XML, utils, BiocGenerics, stats,
        graph, fs, uuid, stringi, glue, RCurl, base64url, base64enc,
        IRkernel, IRdisplay, RColorBrewer, gplots
Suggests: BiocStyle, knitr, rmarkdown, igraph, grDevices
SystemRequirements: Cytoscape (>= 3.7.1), CyREST (>= 3.8.0)
Description: Vizualize, analyze and explore networks using Cytoscape
        via R. Anything you can do using the graphical user interface
        of Cytoscape, you can now do with a single RCy3 function.
License: MIT + file LICENSE
URL: https://github.com/cytoscape/RCy3
BugReports: https://github.com/cytoscape/RCy3/issues
LazyLoad: yes
biocViews: Visualization, GraphAndNetwork, ThirdPartyClient, Network
NeedsCompilation: no
VignetteBuilder: knitr
RoxygenNote: 7.3.2
Encoding: UTF-8
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libxml2-dev
        libssl-dev python3 libzmq3-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:42:06 UTC
RemoteUrl: https://github.com/bioc/RCy3
RemoteRef: HEAD
RemoteSha: 102928c7b6b16d76d5b73c99b574db68c25f34cb
Packaged: 2026-06-19 07:06:18 UTC; root
Author: Jing Chen [cre],
  Alex Pico [aut] (ORCID: <https://orcid.org/0000-0001-5706-2163>),
  Tanja Muetze [aut],
  Paul Shannon [aut],
  Ruth Isserlin [ctb],
  Shraddha Pai [ctb],
  Julia Gustavsen [ctb],
  Georgi Kolishovski [ctb],
  Yihang Xin [ctb]
Maintainer: Jing Chen <jingjingbic@gmail.com>