# ------------------------------------------------
# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "RBPSpecificity" in publications use:'
type: software
license: GPL-3.0-only
title: 'RBPSpecificity: RBP Inherent Specificity and Variation Sensitivity Analysis
  Tool'
version: 0.99.6
doi: 10.1101/2025.03.28.646018v4
identifiers:
- type: url
  value: https://github.com/S00NYI/BITS_Specificity
abstract: Provides tools to analyze RNA Binding Protein (RBP) binding specificities
  from high-throughput sequencing data. Functions include calculating K-mer enrichment,
  Inherent Specificity (IS), and Mutational Sensitivity (VS), along with visualization
  of IS and VS. For detailed methodology and applications, please refer to our manuscript
  (see URL field or vignette).
authors:
- family-names: Yi
  given-names: Soon
  email: cu.soonyi@gmail.com
  orcid: https://orcid.org/0000-0002-4535-6532
preferred-citation:
  type: article
  title: Inherent Specificity and Mutational Sensitivity as Quantitative Metrics for
    RBP Binding
  authors:
  - family-names: Yi
    given-names: Soon
    email: cu.soonyi@gmail.com
    orcid: https://orcid.org/0000-0002-4535-6532
  - family-names: Singh
    given-names: Shashi S.
  - family-names: Ye
    given-names: Xuan
  - family-names: Krishna
    given-names: Rohan
  - family-names: Kothwela
    given-names: Vajira
  - family-names: Jankowsky
    given-names: Eckhard
  - family-names: Luna
    given-names: Joseph M.
  year: '2025'
  journal: bioRxiv
  doi: 10.1101/2025.03.28.646018v4
repository: https://bioc.r-universe.dev
repository-code: https://github.com/S00NYI/RBPSpecificity
commit: e1b8712b78890e3dc3299ab7f9a074b7adc35431
url: https://www.biorxiv.org/content/10.1101/2025.03.28.646018v2
date-released: '2026-07-19'
contact:
- family-names: Yi
  given-names: Soon
  email: cu.soonyi@gmail.com
  orcid: https://orcid.org/0000-0002-4535-6532