# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "RAIDS" in publications use:'
type: software
license: Apache-2.0
title: 'RAIDS: Accurate Inference of Genetic Ancestry from Cancer Sequences'
version: 1.3.0
doi: 10.1158/0008-5472.CAN-22-0682
identifiers:
- type: doi
  value: 10.32614/CRAN.package.RAIDS
abstract: 'This package implements specialized algorithms that enable genetic ancestry
  inference from various cancer sequences sources (RNA, Exome and Whole-Genome sequences).
  This package also implements a simulation algorithm that generates synthetic cancer-derived
  data. This code and analysis pipeline was designed and developed for the following
  publication: Belleau, P et al. Genetic Ancestry Inference from Cancer-Derived Molecular
  Data across Genomic and Transcriptomic Platforms. Cancer Res 1 January 2023; 83
  (1): 49–58.'
authors:
- family-names: Belleau
  given-names: Pascal
  email: pascal_belleau@hotmail.com
  orcid: https://orcid.org/0000-0002-0802-1071
- family-names: Deschênes
  given-names: Astrid
  email: adeschen@hotmail.com
  orcid: https://orcid.org/0000-0001-7846-6749
- family-names: Tuveson
  given-names: David A.
  email: dtuveson@cshl.edu
  orcid: https://orcid.org/0000-0002-8017-2712
- family-names: Krasnitz
  given-names: Alexander
  email: krasnitz@cshl.edu
preferred-citation:
  type: article
  title: Genetic Ancestry Inference from Cancer-Derived Molecular Data across Genomic
    and Transcriptomic Platforms
  authors:
  - family-names: Belleau
    given-names: Pascal
    email: pascal_belleau@hotmail.com
    orcid: https://orcid.org/0000-0002-0802-1071
  - family-names: Deschênes
    given-names: Astrid
    email: adeschen@hotmail.com
    orcid: https://orcid.org/0000-0001-7846-6749
  - family-names: Chambwe
    given-names: Nyasha
  - family-names: Tuveson
    given-names: David A
  - family-names: Krasnitz
    given-names: Alexander
    email: krasnitz@cshl.edu
  journal: Cancer Research
  volume: '83'
  issue: '1'
  year: '2023'
  month: '1'
  issn: 0008-5472
  doi: 10.1158/0008-5472.CAN-22-0682
  url: https://doi.org/10.1158/0008-5472.CAN-22-0682
  start: '49'
  end: '58'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/KrasnitzLab/RAIDS
commit: 8c31b43b8656bfbf888c0c9627083eaca70cf7eb
url: https://krasnitzlab.github.io/RAIDS/
contact:
- family-names: Belleau
  given-names: Pascal
  email: pascal_belleau@hotmail.com
  orcid: https://orcid.org/0000-0002-0802-1071