Package: QTLExperiment
Type: Package
Date: 2025-10-27
Title: S4 classes for QTL summary statistics and metadata
Version: 2.5.0
Authors@R: c(
    person("Christina", "Del Azodi", role=c("aut"), email="cazodi@svi.edu.au"), 
    person("Davis","McCarthy", role=c("ctb"), email="dmccarthy@svi.edu.au"),
    person("Amelia","Dunstone", role=c("cre", "aut"), email="amelia.dunstone@svi.edu.au", comment=c(ORCID="0009-0009-6426-1529")))
License: GPL-3
URL: https://github.com/dunstone-a/QTLExperiment
BugReports: https://github.com/dunstone-a/QTLExperiment/issues
Encoding: UTF-8
Depends: SummarizedExperiment
Imports: methods, rlang, checkmate, dplyr, collapse, vroom, tidyr,
        tibble, utils, stats, ashr, S4Vectors, BiocGenerics
Suggests: testthat, BiocStyle, knitr, rmarkdown, covr
Description: QLTExperiment defines an S4 class for storing and
        manipulating summary statistics from QTL mapping experiments in
        one or more states. It is based on the 'SummarizedExperiment'
        class and contains functions for creating, merging, and
        subsetting objects. 'QTLExperiment' also stores experiment
        metadata and has checks in place to ensure that transformations
        apply correctly.
biocViews: FunctionalGenomics, DataImport, DataRepresentation,
        Infrastructure, Sequencing, SNP, Software
VignetteBuilder: knitr
RoxygenNote: 7.3.3
Config/pak/sysreqs: libicu-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 13:01:55 UTC
RemoteUrl: https://github.com/bioc/QTLExperiment
RemoteRef: HEAD
RemoteSha: ceefea5332ffa5f9cc85d23008ea9c66734613c6
NeedsCompilation: no
Packaged: 2026-07-07 06:41:13 UTC; root
Author: Christina Del Azodi [aut],
  Davis McCarthy [ctb],
  Amelia Dunstone [cre, aut] (ORCID:
    <https://orcid.org/0009-0009-6426-1529>)
Maintainer: Amelia Dunstone <amelia.dunstone@svi.edu.au>