# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "ProteoDisco" in publications use:'
type: software
license: GPL-3.0-only
title: 'ProteoDisco: Generation of customized protein variant databases from genomic
  variants, splice-junctions and manual sequences'
version: 1.11.0
doi: 10.1093/bioinformatics/btab809
abstract: ProteoDisco is an R package to facilitate proteogenomics studies. It houses
  functions to create customized (variant) protein databases based on user-submitted
  genomic variants, splice-junctions, fusion genes and manual transcript sequences.
  The flexible workflow can be adopted to suit a myriad of research and experimental
  settings.
authors:
- family-names: Riet
  given-names: Job
  name-particle: van
  email: jobvriet@gmail.com
- family-names: Geer
  given-names: Wesley
  name-particle: van de
  email: w.vandegeer@erasmusmc.nl
preferred-citation:
  type: article
  title: 'ProteoDisco: A flexible R approach to generate customized protein databases
    for extended search space of novel and variant proteins in proteogenomic studies'
  authors:
  - family-names: Geer
    given-names: Wesley S.
    name-particle: van de
  - family-names: Riet
    given-names: Job
    name-particle: van
    email: jobvriet@gmail.com
  - family-names: Werken
    given-names: Harmen J. G.
    name-particle: van de
  journal: Bioinformatics
  year: '2022'
  volume: '38'
  issue: '5'
  doi: 10.1093/bioinformatics/btab809
  url: https://doi.org/10.1093/bioinformatics/btab809
  start: 1437-1439
repository: https://bioc.r-universe.dev
repository-code: https://github.com/ErasmusMC-CCBC/ProteoDisco
url: https://github.com/ErasmusMC-CCBC/ProteoDisco
date-released: '2022-05-23'
contact:
- family-names: Riet
  given-names: Job
  name-particle: van
  email: jobvriet@gmail.com