NEWS

---

ProtGenerics 1.35.4

• Move 'backendParallelFactor' and 'backendBpparam' and 'supportsSetBackend' generics from 'Spectra'.

ProtGenerics 1.35.3

• Move 'backendInitialize', 'backendMerge', 'setBackend', 'isReadOnly', 'peaksData', 'peaksData<-' and 'peaksVariables', 'filterRanges', 'filterValues', 'filterPrecursorMzRange', 'filterPrecursorMzValues', 'filterProductMzRange', 'filterProductMzValues' generics from the Spectra package.

ProtGenerics 1.35.2

• Add 'filterSpectra' generic.

ProtGenerics 1.35.1

• Add 'filterFeatures' generic.

ProtGenerics 1.33.1

• Rename uniqueMsLevel() to uniqueMsLevels()

ProtGenerics 1.29.1

• Add spectrapply generic

ProtGenerics 1.27.2

• Add addProcessing generic <2022-01-04 Tue>

ProtGenerics 1.27.1

• Add new adjacencyMatrix generic <2021-12-11 Sat>

ProtGenerics 1.27.0

• New Bioc devel version

ProtGenerics 1.25.1

• add bin, compareChromatograms and compareSpectra

ProtGenerics 1.25.0

• Bioc devel (3.14) version bump

ProtGenerics 1.23.9

• Added new uniqueMsLevel generic <2021-04-08 Thu>

ProtGenerics 1.23.8

• Added new filterPrecursorCharge generic <2021-04-06 Tue>

ProtGenerics 1.23.7

• Add ProcessingStep object and related methods (moved from Spectra)

ProtGenerics 1.23.6

• Added quantify generics (moved from MSnbase) <2021-01-02 Sat>

ProtGenerics 1.23.5

• new alignRt generic.

ProtGenerics 1.23.4

• new virtual Param class.

ProtGenerics 1.23.3

• new filterIntensity generic.

ProtGenerics 1.23.2

• new compounds generic.

ProtGenerics 1.23.1

• new calculateFragments generic (moved from MSnbase)

ProtGenerics 1.19.3

• new impute generic

ProtGenerics 1.19.2

• new filterNA generic

ProtGenerics 1.19.1

• new aggregateFeatures generic

ProtGenerics 1.17.4

• New generics needed in Spectra and Chromatograms packages <2019-08-20 Tue>

ProtGenerics 1.17.3

• New tolerance generic <2019-08-16 Fri>

ProtGenerics 1.17.2

• New generics (see issue #8) <2019-05-12 Sun>

ProtGenerics 1.17.1

• Move many generics from MSnbase <2019-05-11 Sat>

ProtGenerics 1.9.1

• add writeMSData <2017-09-20 Wed>

ProtGenerics 1.5.1

• added isCentroided generic <2016-07-23 Sat>

ProtGenerics 1.5.0

• Version bump Bioc devel

ProtGenerics 1.4.0

• Version bump Bioc 3.3

ProtGenerics 1.3.3

• exporting mz<- generic <2015-10-19 Mon>

ProtGenerics 1.3.2

• Not depending on BiocGenerics <2015-10-16 Fri>

ProtGenerics 1.3.1

• added chomatogram generic (previously defined in MSnbase) <2015-10-15 Thu>

ProtGenerics 1.3.0

• Bioc release 3.3

ProtGenerics 1.2.0

• Bioc release 3.2

ProtGenerics 1.1.1

• new mz<- generic function <2015-10-01 Thu>

ProtGenerics 1.1.0

• Bioc devel version 3.2

ProtGenerics 1.0.0

• Bioc release version 3.1

ProtGenerics 0.99.3

• update man with when and why ProtGenerics [2015-03-16 Mon]

ProtGenerics 0.99.2

• updating DESCRIPTION as with BiocContributions::clean [2015-03-03 Tue]

ProtGenerics 0.99.1

• Adding NEWS file [2015-02-27 Fri]

ProtGenerics 0.99.0

• adding ProtGenerics to Manifest