Package: PrInCE Title: Predicting Interactomes from Co-Elution Version: 1.29.0 Authors@R: c( person("Michael", "Skinnider", email = "michael.skinnider@msl.ubc.ca", role = c("aut", "trl", "cre")), person("R. Greg", "Stacey", email = "richard.greg.stacey@msl.ubc.ca", role = "ctb"), person("Nichollas", "Scott", email = "nichollas.scott@unimelb.edu.au", role = "ctb"), person("Anders", "Kristensen", role = "ctb"), person("Leonard", "Foster", email = "foster@msl.ubc.ca", role = c("aut", "led"))) BugReports: https://github.com/fosterlab/PrInCE/issues Description: PrInCE (Predicting Interactomes from Co-Elution) uses a naive Bayes classifier trained on dataset-derived features to recover protein-protein interactions from co-elution chromatogram profiles. This package contains the R implementation of PrInCE. Depends: R (>= 3.6.0) Imports: purrr (>= 0.2.4), dplyr (>= 0.7.4), tidyr (>= 0.8.99), forecast (>= 8.2), progress (>= 1.1.2), Hmisc (>= 4.0), naivebayes (>= 0.9.1), robustbase (>= 0.92-7), ranger (>= 0.8.0), LiblineaR (>= 2.10-8), speedglm (>= 0.3-2), tester (>= 0.1.7), magrittr (>= 1.5), Biobase (>= 2.40.0), MSnbase (>= 2.8.3), stats, utils, methods, Rdpack (>= 0.7) Suggests: BiocStyle, knitr, rmarkdown biocViews: Proteomics, SystemsBiology, NetworkInference VignetteBuilder: knitr License: GPL-3 + file LICENSE Encoding: UTF-8 RdMacros: Rdpack RoxygenNote: 7.1.1 Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libuv1-dev libxml2-dev libnetcdf-dev libssl-dev zlib1g-dev Repository: https://bioc.r-universe.dev Date/Publication: 2026-04-28 12:49:42 UTC RemoteUrl: https://github.com/bioc/PrInCE RemoteRef: HEAD RemoteSha: 9fd4073a2e7e088baeaf23f4a0fbc259a5409a3e NeedsCompilation: no Packaged: 2026-06-12 06:44:26 UTC; root Author: Michael Skinnider [aut, trl, cre], R. Greg Stacey [ctb], Nichollas Scott [ctb], Anders Kristensen [ctb], Leonard Foster [aut, led] Maintainer: Michael Skinnider