Package: PostChicago
Type: Package
Title: PostChicago - visualization and integration of Capture-(Hi)C
        data
Version: 0.99.2
Authors@R: c(
    person(
      "Angelika", "Feldmann",
      email = "angelika.feldmann@dkfz-heidelberg.de",
      role = c("aut", "cre"),
      comment = c(ORCID="0000-0001-7094-8081")
    ),
	person(
      "Samuel", "Krall",
      email = "sammikrall@gmail.com",
      role = c("aut")
    ),
	person(
      "Belinda", "Blum",
      email = "belinda.blum@dkfz.de",
      role = c("aut")
    )
  )
Description: PostCHiCAGO (stylized from here as PostChicago) is a
        toolbox for visualising and assessing the output from the
        CHiCAGO pipeline (SOURCE). The plots created by PostChicago
        show reads or CHiCAGO scores over different regions.
        PostChicago can integrate different experiments with other
        types of datasets and compare separate conditions.
biocViews: Software, GeneRegulation, Epigenetics, Visualization
License: Artistic-2.0
URL: https://github.com/FeldmannLabDKFZ/PostChicago
Encoding: UTF-8
RoxygenNote: 7.3.3
Imports: GenomicRanges, pheatmap, S4Vectors, IRanges, ggplot2,
        RColorBrewer, Chicago, utils, graphics, grDevices, stringr,
        gridExtra, BiocFileCache, matrixStats, rtracklayer, patchwork,
        dplyr, tidyr, rlang
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), data.table,
        BiocGenerics, codetools, BiocStyle, ragg
Config/testthat/edition: 3
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2026-06-21 00:43:23 UTC; root
Depends: R (>= 4.4.0)
Config/pak/sysreqs: cmake make libbz2-dev libicu-dev liblzma-dev
        libuv1-dev libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-06-05 14:10:56 UTC
RemoteUrl: https://github.com/bioc/PostChicago
RemoteRef: HEAD
RemoteSha: 9927510d79959375849fa26f987c73ee4ab05110
Author: Angelika Feldmann [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-7094-8081>),
  Samuel Krall [aut],
  Belinda Blum [aut]
Maintainer: Angelika Feldmann <angelika.feldmann@dkfz-heidelberg.de>