Package: PlinkMatrix
Title: DelayedArray interface for plink bed files
Version: 1.1.0
Authors@R: 
    c(person(given = "Vince",
           family = "Carey",
           role = c("aut", "cre"),
           email = "stvjc@channing.harvard.edu",
           comment = c(ORCID = "0000-0003-4046-0063")),
      person("NHGRI U24HG004059", role="fnd"))
Description: This package provides a DelayedArray interface for plink
        bed files. There is support for interfacing to plink genotype
        data via RangedSummarizedExperiment. Example data from the
        GEUVADIS project (internationalgenome.org) are used for
        demonstration.
Depends: R (>= 4.1.0), methods, Rcpp, DelayedArray,
        SummarizedExperiment
Suggests: knitr, BiocStyle, testthat, rmarkdown, irlba, GenomeInfoDb
Imports: BiocFileCache, GenomicRanges, IRanges
License: MIT + file LICENSE
VignetteBuilder: knitr
biocViews: Infrastructure, Genetics
Encoding: UTF-8
URL: https://github.com/vjcitn/PlinkMatrix
BugReports: https://github.com/vjcitn/PlinkMatrix/issues
RoxygenNote: 7.3.3
LinkingTo: Rcpp
Config/pak/sysreqs: libicu-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 13:06:58 UTC
RemoteUrl: https://github.com/bioc/PlinkMatrix
RemoteRef: HEAD
RemoteSha: bfa6bf024320391550fbb2445069b7ce809247a4
NeedsCompilation: yes
Packaged: 2026-07-04 07:54:43 UTC; root
Author: Vince Carey [aut, cre] (ORCID: <https://orcid.org/0000-0003-4046-0063>),
  NHGRI U24HG004059 [fnd]
Maintainer: Vince Carey <stvjc@channing.harvard.edu>