To cite package ‘Pirat’ in publications use:

  Etourneau L, Fancello L, Wieczorek S, Varoquaux N, Burger T (2024).
  _Pirat: Precursor or Peptide Imputation under Random Truncation_. R
  package version 0.99.26, <https://bioconductor.org/packages/Pirat>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {Pirat: Precursor or Peptide Imputation under Random Truncation},
    author = {Lucas Etourneau and Laura Fancello and Samuel Wieczorek and Nelle Varoquaux and Thomas Burger},
    year = {2024},
    note = {R package version 0.99.26},
    url = {https://bioconductor.org/packages/Pirat},
  }