NEWS
PLSDAbatch 1.99.1
- Date: 2026-01-06
- Text: Fix the figure display issue
- Details: Fix the issue where Figures 2 and 3 are not shown in the vignette.
PLSDAbatch 1.99.0
- Date: 2025-12-26
- Text: improve usability
- Details:
- Added a
mode argument to PLSDA_batch().
- Added a
criterion argument to linear_regres() to select P-values
from the optimal model based on the specified criterion.
- Added a
return.model arugument to linear_regres() to reduce memory
usage when set to FALSE.
- Extended
Scatter_Density() to support any multivariate method that
returns component scores, including PCA and PLS, with corresponding
arguments updated.
- Added
lighten() and darken() functions for enhanced color
generation.
- Refined multiple functions to improve usability.
- Updated the vignette accordingly.
PLSDAbatch 1.1.1
- Date: 2024-09-18
- Text: pca function clash
- Details: Avoid the clash of function
pca() from vegan and mixOmics packages
PLSDAbatch 0.99.3
- Date: 2023-12-21
- Text: Debug percentileofscore
- Details: Debug the function
percentileofscore(), thus the generated data
frame has rownames and colnames as the input data frame to ensure the operation
of function percentile_norm()
PLSDAbatch 0.99.2
- Date: 2023-11-14
- Text: Updates for Bioconductor
- Details: Update several documents
- DESCRIPTION: Add a URL field pointing to the GitHub repository
- vignettes: Wrap as many texts as possible to a character limit of 80;
Use
library() calls instead of sapply();
Use TreeSummarizedExperiment package to reshape datasets;
Remove colorize()
- R: Update
for() loops; Remove extra ### lines
PLSDAbatch 0.99.1
- Date: 2023-05-26
- Text: Update Imports
- Details: Move
pheatmap, vegan, Biobase, BiocStyle from Suggests to
Imports to ensure the generation of vignette
PLSDAbatch 0.99.0
- Date: 2023-04-03
- Details: This version is equal to the version 0.2.3 on GitHub
(https://github.com/EvaYiwenWang/PLSDAbatch-source-code)