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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "OutSplice" in publications use:'
type: software
license: GPL-2.0-only
title: 'OutSplice: Comparison of Splicing Events between Tumor and Normal Samples'
version: 1.5.0
abstract: An easy to use tool that can compare splicing events in tumor and normal
  tissue samples using either a user generated matrix, or data from The Cancer Genome
  Atlas (TCGA). This package generates a matrix of splicing outliers that are significantly
  over or underexpressed in tumors samples compared to normal denoted by chromosome
  location. The package also will calculate the splicing burden in each tumor and
  characterize the types of splicing events that occur.
authors:
- family-names: Bendik
  given-names: Joseph
  orcid: https://orcid.org/0000-0003-0877-5639
- family-names: Kalavacherla
  given-names: Sandhya
  orcid: https://orcid.org/0000-0003-0485-9042
- family-names: Considine
  given-names: Michael
  orcid: https://orcid.org/0000-0002-8666-4857
- family-names: Afsari
  given-names: Bahman
  orcid: https://orcid.org/0000-0001-8717-7199
- family-names: Ochs
  given-names: Michael F.
- family-names: Califano
  given-names: Joseph
  orcid: https://orcid.org/0000-0002-4715-6761
- family-names: Gaykalova
  given-names: Daria A.
  orcid: https://orcid.org/0000-0001-5037-0147
- family-names: Fertig
  given-names: Elana
  orcid: https://orcid.org/0000-0003-3204-342X
- family-names: Guo
  given-names: Theresa
  email: twguo@health.ucsd.edu
  orcid: https://orcid.org/0000-0002-1689-3275
repository: https://bioc.r-universe.dev
repository-code: https://github.com/GuoLabUCSD/OutSplice
url: https://github.com/GuoLabUCSD/OutSplice
contact:
- family-names: Guo
  given-names: Theresa
  email: twguo@health.ucsd.edu
  orcid: https://orcid.org/0000-0002-1689-3275