Package: Nebulosa
Type: Package
Title: Single-Cell Data Visualisation Using Kernel Gene-Weighted
        Density Estimation
Version: 1.23.0
Authors@R: c(person("Jose", "Alquicira-Hernandez", 
    email = "alquicirajose@gmail.com",
    role = c("aut", "cre"), 
    comment = c(ORCID = "0000-0002-9049-7780")))
Description: This package provides a enhanced visualization of
        single-cell data based on gene-weighted density estimation.
        Nebulosa recovers the signal from dropped-out features and
        allows the inspection of the joint expression from multiple
        features (e.g. genes). Seurat and SingleCellExperiment objects
        can be used within Nebulosa.
URL: https://github.com/powellgenomicslab/Nebulosa
BugReports: https://github.com/powellgenomicslab/Nebulosa/issues
License: GPL-3
Encoding: UTF-8
Depends: R (>= 4.0), ggplot2, patchwork
Imports: SingleCellExperiment, SummarizedExperiment, SeuratObject, ks,
        Matrix, stats, methods, ggrastr
RoxygenNote: 7.2.3
VignetteBuilder: knitr
Suggests: testthat, BiocStyle, knitr, rmarkdown, covr, scater, scran,
        DropletUtils, igraph, BiocFileCache, Seurat
biocViews: Software, GeneExpression, SingleCell, Visualization,
        DimensionReduction
Config/pak/sysreqs: libcairo2-dev libfontconfig1-dev libfreetype6-dev
        libfribidi-dev libharfbuzz-dev libicu-dev libjpeg-dev
        libpng-dev libtiff-dev libwebp-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:53:24 UTC
RemoteUrl: https://github.com/bioc/Nebulosa
RemoteRef: HEAD
RemoteSha: 3cd21b87ad85ef0cef5d6e96c5d43599e56a99b5
NeedsCompilation: no
Packaged: 2026-07-04 02:00:26 UTC; root
Author: Jose Alquicira-Hernandez [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-9049-7780>)
Maintainer: Jose Alquicira-Hernandez <alquicirajose@gmail.com>