To cite package ‘MultipleAlignment’ in publications use:

  Carlson M, Aboyoun P (2026). _MultipleAlignment: Representation of
  multiple sequence alignments in Bioconductor_. R package version
  0.99.4, <https://bioconductor.org/packages/MultipleAlignment>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {MultipleAlignment: Representation of multiple sequence alignments in Bioconductor},
    author = {Marc Carlson and Patrick Aboyoun},
    year = {2026},
    note = {R package version 0.99.4},
    url = {https://bioconductor.org/packages/MultipleAlignment},
  }