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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "MsQuality" in publications use:'
type: software
license: GPL-3.0-only
title: 'MsQuality: MsQuality - Quality metric calculation from Spectra and MsExperiment
  objects'
version: 1.5.0
doi: 10.32614/CRAN.package.MsQuality
abstract: 'The MsQuality provides functionality to calculate quality metrics for mass
  spectrometry-derived, spectral data at the per-sample level. MsQuality relies on
  the mzQC framework of quality metrics defined by the Human Proteom Organization-Proteomics
  Standards Initiative (HUPO-PSI). These metrics quantify the quality of spectral
  raw files using a controlled vocabulary. The package is especially addressed towards
  users that acquire mass spectrometry data on a large scale (e.g. data sets from
  clinical settings consisting of several thousands of samples). The MsQuality package
  allows to calculate low-level quality metrics that require minimum information on
  mass spectrometry data: retention time, m/z values, and associated intensities.
  MsQuality relies on the Spectra package, or alternatively the MsExperiment package,
  and its infrastructure to store spectral data.'
authors:
- family-names: Naake
  given-names: Thomas
  email: thomasnaake@googlemail.com
  orcid: https://orcid.org/0000-0001-7917-5580
- family-names: Rainer
  given-names: Johannes
  email: johannes.rainer@eurac.edu
  orcid: https://orcid.org/0000-0002-6977-7147
repository: https://bioc.r-universe.dev
repository-code: https://www.github.com/tnaake/MsQuality/
commit: 8e3581c2ba9e98b3f3b221a3aa9db2ba4dc4835a
url: https://www.github.com/tnaake/MsQuality/
date-released: '2024-02-21'
contact:
- family-names: Naake
  given-names: Thomas
  email: thomasnaake@googlemail.com
  orcid: https://orcid.org/0000-0001-7917-5580