Package: MsBackendMetaboLights
Title: Retrieve Mass Spectrometry Data from MetaboLights
Version: 1.7.3
Authors@R: 
    c(person(given = "Johannes", family = "Rainer",
             email = "Johannes.Rainer@eurac.edu",
             role = c("aut", "cre"),
             comment = c(ORCID = "0000-0002-6977-7147")),
      person(given = "Philippine", family = "Louail",
             email = "philippine.louail@eurac.edu",
             role = c("aut"),
             comment = c(ORCID = "0009-0007-5429-6846")),
      person(given = "Gabriele", family = "Tomè",
             email = "gabriele.tome@eurac.edu",
             role = c("aut"),
             comment = c(ORCID = "0000-0002-3976-6068",
             fnd = "MetaRbolomics4Galaxy project (CUP: D53C25001030003) co-funded by the Autonomous Province of Bolzano under the Joint Projects South Tyrol–Germany 2025 program."))
	     )
Description: MetaboLights is one of the main public repositories for
        storage of metabolomics experiments, which includes analysis
        results as well as raw data. The MsBackendMetaboLights package
        provides functionality to retrieve and represent mass
        spectrometry (MS) data from MetaboLights. Data files are
        downloaded and cached locally avoiding repetitive downloads. MS
        data from metabolomics experiments can thus be directly and
        seamlessly integrated into R-based analysis workflows with the
        Spectra and MsBackendMetaboLights package.
Depends: R (>= 4.2.0), Spectra (>= 1.15.12)
Imports: curl, ProtGenerics, BiocFileCache, S4Vectors, methods,
        progress, utils, MsCoreUtils (>= 1.23.8)
Suggests: testthat, rmarkdown, mzR, knitr, BiocStyle
License: Artistic-2.0
Encoding: UTF-8
VignetteBuilder: knitr
BugReports: https://github.com/RforMassSpectrometry/MsBackendMetaboLights/issues
URL: https://github.com/RforMassSpectrometry/MsBackendMetaboLights
biocViews: Infrastructure, MassSpectrometry, Metabolomics, DataImport,
        Proteomics
Roxygen: list(markdown=TRUE)
RoxygenNote: 8.0.0
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libssl-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-06-18 05:59:56 UTC
RemoteUrl: https://github.com/bioc/MsBackendMetaboLights
RemoteRef: HEAD
RemoteSha: d94070748ac479d580d53419345e0f27890a319c
NeedsCompilation: no
Packaged: 2026-06-18 14:09:33 UTC; root
Author: Johannes Rainer [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-6977-7147>),
  Philippine Louail [aut] (ORCID:
    <https://orcid.org/0009-0007-5429-6846>),
  Gabriele Tomè [aut] (ORCID: <https://orcid.org/0000-0002-3976-6068>,
    fnd: MetaRbolomics4Galaxy project (CUP: D53C25001030003) co-funded
    by the Autonomous Province of Bolzano under the Joint Projects
    South Tyrol–Germany 2025 program.)
Maintainer: Johannes Rainer <Johannes.Rainer@eurac.edu>