# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "Motif2Site" in publications use:' type: software license: GPL-2.0-only title: 'Motif2Site: Detect binding sites from motifs and ChIP-seq experiments, and compare binding sites across conditions' version: 1.9.0 abstract: Detect binding sites using motifs IUPAC sequence or bed coordinates and ChIP-seq experiments in bed or bam format. Combine/compare binding sites across experiments, tissues, or conditions. All normalization and differential steps are done using TMM-GLM method. Signal decomposition is done by setting motifs as the centers of the mixture of normal distribution curves. authors: - name: Peyman Zarrineh email: peyman.zarrineh@manchester.ac.uk orcid: https://orcid.org/0000-0003-4820-4101 repository: https://bioc.r-universe.dev repository-code: https://github.com/ManchesterBioinference/Motif2Site url: https://github.com/ManchesterBioinference/Motif2Site contact: - name: Peyman Zarrineh email: peyman.zarrineh@manchester.ac.uk orcid: https://orcid.org/0000-0003-4820-4101