{"...1":1,"metabolite":"1-Aminocyclopropanecarboxylic acid","KEGG":"C01234","module_id":"M00368","module_name":"Ethylene biosynthesis, methionine => ethylene","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Cysteine and methionine metabolism"} {"...1":2,"metabolite":"2-Aminomuconate","KEGG":"C02220","module_id":"M00038","module_name":"Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Aromatic amino acid metabolism"} {"...1":3,"metabolite":"2-Phosphoglyceric acid","KEGG":"C00631","module_id":"M00001","module_name":"Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Central carbohydrate metabolism"} {"...1":4,"metabolite":"2-Phosphoglyceric acid","KEGG":"C00631","module_id":"M00002","module_name":"Glycolysis, core 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{"...1":15,"metabolite":"Acetyl coenzyme A","KEGG":"C00024","module_id":"M00030","module_name":"Lysine biosynthesis, AAA pathway, 2-oxoglutarate => 2-aminoadipate => lysine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Lysine metabolism"} {"...1":16,"metabolite":"Acetyl coenzyme A","KEGG":"C00024","module_id":"M00082","module_name":"Fatty acid biosynthesis, initiation","upper_hierarchy":"Pathway modules","middle_hierarchy":"Lipid metabolism","lower_hierarchy":"Fatty acid metabolism"} {"...1":17,"metabolite":"Acetyl coenzyme A","KEGG":"C00024","module_id":"M00085","module_name":"Fatty acid elongation in mitochondria","upper_hierarchy":"Pathway modules","middle_hierarchy":"Lipid metabolism","lower_hierarchy":"Fatty acid metabolism"} {"...1":18,"metabolite":"Acetyl coenzyme A","KEGG":"C00024","module_id":"M00087","module_name":"beta-Oxidation","upper_hierarchy":"Pathway modules","middle_hierarchy":"Lipid 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{"...1":43,"metabolite":"ADP","KEGG":"C00008","module_id":"M00049","module_name":"Adenine ribonucleotide biosynthesis, IMP => ADP,ATP","upper_hierarchy":"Pathway modules","middle_hierarchy":"Nucleotide metabolism","lower_hierarchy":"Purine metabolism"} {"...1":44,"metabolite":"ADP","KEGG":"C00008","module_id":"M00053","module_name":"Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP","upper_hierarchy":"Pathway modules","middle_hierarchy":"Nucleotide metabolism","lower_hierarchy":"Purine metabolism"} {"...1":45,"metabolite":"alpha-Ketoglutaric acid","KEGG":"C00026","module_id":"M00009","module_name":"Citrate cycle (TCA cycle, Krebs cycle)","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Central carbohydrate metabolism"} {"...1":46,"metabolite":"alpha-Ketoglutaric acid","KEGG":"C00026","module_id":"M00010","module_name":"Citrate cycle, first carbon oxidation, oxaloacetate => 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{"...1":68,"metabolite":"beta-Alanine","KEGG":"C00099","module_id":"M00119","module_name":"Pantothenate biosynthesis, valine/L-aspartate => pantothenate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":69,"metabolite":"beta-Alanine","KEGG":"C00099","module_id":"M00913","module_name":"Pantothenate biosynthesis, 2-oxoisovalerate/spermine => pantothenate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":70,"metabolite":"Biotin","KEGG":"C00120","module_id":"M00123","module_name":"Biotin biosynthesis, pimeloyl-ACP/CoA => biotin","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":71,"metabolite":"Biotin","KEGG":"C00120","module_id":"M00573","module_name":"Biotin biosynthesis, BioI 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{"...1":102,"metabolite":"Fumarate","KEGG":"C00122","module_id":"M00011","module_name":"Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Central carbohydrate metabolism"} {"...1":103,"metabolite":"Fumarate","KEGG":"C00122","module_id":"M00029","module_name":"Urea cycle","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Arginine and proline metabolism"} {"...1":104,"metabolite":"Fumarate","KEGG":"C00122","module_id":"M00044","module_name":"Tyrosine degradation, tyrosine => homogentisate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Aromatic amino acid metabolism"} {"...1":105,"metabolite":"Fumarate","KEGG":"C00122","module_id":"M00148","module_name":"Succinate dehydrogenase (ubiquinone)","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy 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{"...1":110,"metabolite":"Fumarate","KEGG":"C00122","module_id":"M00376","module_name":"3-Hydroxypropionate bi-cycle","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Carbon fixation"} {"...1":111,"metabolite":"Fumarate","KEGG":"C00122","module_id":"M00620","module_name":"Incomplete reductive citrate cycle, acetyl-CoA => oxoglutarate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Carbon fixation"} {"...1":112,"metabolite":"Fumarate","KEGG":"C00122","module_id":"M00622","module_name":"Nicotinate degradation, nicotinate => fumarate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":113,"metabolite":"Fumarate","KEGG":"C00122","module_id":"M00844","module_name":"Arginine biosynthesis, ornithine => arginine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid 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{"...1":122,"metabolite":"Glucose","KEGG":"C00092","module_id":"M00855","module_name":"Glycogen degradation, glycogen => glucose-6P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Other carbohydrate metabolism"} {"...1":124,"metabolite":"Glucose 6-phosphate","KEGG":"C00092","module_id":"M00855","module_name":"Glycogen degradation, glycogen => glucose-6P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Other carbohydrate metabolism"} {"...1":126,"metabolite":"Glucose 6-phosphate","KEGG":"C00092","module_id":"M00855","module_name":"Glycogen degradation, glycogen => glucose-6P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Other carbohydrate metabolism"} {"...1":128,"metabolite":"Glutathionesulfonic acid"} {"...1":129,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00001","module_name":"Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Central carbohydrate metabolism"} {"...1":130,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00002","module_name":"Glycolysis, core module involving three-carbon compounds","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Central carbohydrate metabolism"} {"...1":131,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00003","module_name":"Gluconeogenesis, oxaloacetate => fructose-6P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Central carbohydrate metabolism"} {"...1":132,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00004","module_name":"Pentose phosphate pathway (Pentose phosphate cycle)","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Central carbohydrate metabolism"} {"...1":133,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00007","module_name":"Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Central carbohydrate metabolism"} {"...1":134,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00008","module_name":"Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Central carbohydrate metabolism"} {"...1":135,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00061","module_name":"D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Other carbohydrate metabolism"} {"...1":137,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00165","module_name":"Reductive pentose phosphate cycle (Calvin cycle)","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Carbon fixation"} {"...1":138,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00166","module_name":"Reductive pentose phosphate cycle, ribulose-5P => glyceraldehyde-3P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Carbon fixation"} {"...1":139,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00167","module_name":"Reductive pentose phosphate cycle, glyceraldehyde-3P => ribulose-5P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Carbon fixation"} {"...1":140,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00308","module_name":"Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Central carbohydrate metabolism"} {"...1":141,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00345","module_name":"Formaldehyde assimilation, ribulose monophosphate pathway","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Methane metabolism"} {"...1":142,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00552","module_name":"D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Other carbohydrate metabolism"} {"...1":143,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00631","module_name":"D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Other carbohydrate metabolism"} {"...1":144,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00633","module_name":"Semi-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate-3P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Central carbohydrate metabolism"} {"...1":146,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00916","module_name":"Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":147,"metabolite":"D-Glyceraldehyde 3-phosphate","KEGG":"C00118","module_id":"M00935","module_name":"Methanofuran biosynthesis","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Methane metabolism"} {"...1":148,"metabolite":"Glycine","KEGG":"C00037","module_id":"M00346","module_name":"Formaldehyde assimilation, serine pathway","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Methane metabolism"} {"...1":149,"metabolite":"Glycine","KEGG":"C00037","module_id":"M00532","module_name":"Photorespiration","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Other carbohydrate metabolism"} {"...1":150,"metabolite":"Glycine","KEGG":"C00037","module_id":"M00621","module_name":"Glycine cleavage system","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Serine and threonine metabolism"} {"...1":151,"metabolite":"Glycine","KEGG":"C00037","module_id":"M00868","module_name":"Heme biosynthesis, animals and fungi, glycine => heme","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":152,"metabolite":"Glycine","KEGG":"C00037","module_id":"M00895","module_name":"Thiamine biosynthesis, prokaryotes, AIR (+ DXP/glycine) => TMP/TPP","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":153,"metabolite":"Glycine","KEGG":"C00037","module_id":"M00896","module_name":"Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":154,"metabolite":"Glycine","KEGG":"C00037","module_id":"M00897","module_name":"Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":155,"metabolite":"Glycine","KEGG":"C00037","module_id":"M00898","module_name":"Thiamine biosynthesis, pyridoxal-5P => TMP/thiamine/TPP","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":156,"metabolite":"GMP","KEGG":"C00144","module_id":"M00050","module_name":"Guanine ribonucleotide biosynthesis, IMP => GDP,GTP","upper_hierarchy":"Pathway modules","middle_hierarchy":"Nucleotide metabolism","lower_hierarchy":"Purine metabolism"} {"...1":157,"metabolite":"GMP","KEGG":"C00144","module_id":"M00959","module_name":"Guanine ribonucleotide degradation, GMP => Urate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Nucleotide metabolism","lower_hierarchy":"Purine metabolism"} {"...1":158,"metabolite":"L-Alanine","KEGG":"C00041","module_id":"M00171","module_name":"C4-dicarboxylic acid cycle, NAD - malic enzyme type","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Carbon fixation"} {"...1":160,"metabolite":"L-Arginine","KEGG":"C00062","module_id":"M00029","module_name":"Urea cycle","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Arginine and proline metabolism"} {"...1":161,"metabolite":"L-Arginine","KEGG":"C00062","module_id":"M00047","module_name":"Creatine pathway","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Arginine and proline metabolism"} {"...1":162,"metabolite":"L-Arginine","KEGG":"C00062","module_id":"M00133","module_name":"Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Polyamine biosynthesis"} {"...1":163,"metabolite":"L-Arginine","KEGG":"C00062","module_id":"M00134","module_name":"Polyamine biosynthesis, arginine => ornithine => putrescine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Polyamine biosynthesis"} {"...1":167,"metabolite":"L-Arginine","KEGG":"C00062","module_id":"M00844","module_name":"Arginine biosynthesis, ornithine => arginine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Arginine and proline metabolism"} {"...1":168,"metabolite":"L-Arginine","KEGG":"C00062","module_id":"M00845","module_name":"Arginine biosynthesis, glutamate => acetylcitrulline => arginine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Arginine and proline metabolism"} {"...1":169,"metabolite":"L-Arginine","KEGG":"C00062","module_id":"M00879","module_name":"Arginine succinyltransferase pathway, arginine => glutamate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Arginine and proline metabolism"} {"...1":170,"metabolite":"L-Arginine","KEGG":"C00062","module_id":"M00947","module_name":"D-Arginine racemization, D-arginine => L-arginine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Other amino acid metabolism"} {"...1":171,"metabolite":"L-Asparagine","KEGG":"C00152"} {"...1":172,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00016","module_name":"Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Lysine metabolism"} {"...1":173,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00017","module_name":"Methionine biosynthesis, aspartate => homoserine => methionine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Cysteine and methionine metabolism"} {"...1":174,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00018","module_name":"Threonine biosynthesis, aspartate => homoserine => threonine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Serine and threonine metabolism"} {"...1":175,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00029","module_name":"Urea cycle","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Arginine and proline metabolism"} {"...1":176,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00033","module_name":"Ectoine biosynthesis, aspartate => ectoine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Serine and threonine metabolism"} {"...1":177,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00115","module_name":"NAD biosynthesis, aspartate => quinolinate => NAD","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":178,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00119","module_name":"Pantothenate biosynthesis, valine/L-aspartate => pantothenate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":179,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00170","module_name":"C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Carbon fixation"} {"...1":180,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00171","module_name":"C4-dicarboxylic acid cycle, NAD - malic enzyme type","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Carbon fixation"} {"...1":181,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00525","module_name":"Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Lysine metabolism"} {"...1":182,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00526","module_name":"Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Lysine metabolism"} {"...1":183,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00527","module_name":"Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Lysine metabolism"} {"...1":184,"metabolite":"L-Aspartic acid","KEGG":"C00049","module_id":"M00844","module_name":"Arginine biosynthesis, ornithine => arginine","upper_hierarchy":"Pathway 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{"...1":190,"metabolite":"L-Cysteine","KEGG":"C00097","module_id":"M00338","module_name":"Cysteine biosynthesis, homocysteine + serine => cysteine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Cysteine and methionine metabolism"} {"...1":191,"metabolite":"L-Cysteine","KEGG":"C00097","module_id":"M00609","module_name":"Cysteine biosynthesis, methionine => cysteine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Cysteine and methionine metabolism"} {"...1":194,"metabolite":"L-Cystine","KEGG":"C00491"} {"...1":195,"metabolite":"L-Glutamic acid","KEGG":"C00025","module_id":"M00015","module_name":"Proline biosynthesis, glutamate => proline","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Arginine and proline metabolism"} {"...1":196,"metabolite":"L-Glutamic acid","KEGG":"C00025","module_id":"M00027","module_name":"GABA (gamma-Aminobutyrate) shunt","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Other amino acid metabolism"} {"...1":197,"metabolite":"L-Glutamic acid","KEGG":"C00025","module_id":"M00028","module_name":"Ornithine biosynthesis, glutamate => ornithine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Arginine and proline metabolism"} {"...1":198,"metabolite":"L-Glutamic acid","KEGG":"C00025","module_id":"M00045","module_name":"Histidine degradation, histidine => N-formiminoglutamate => glutamate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Histidine metabolism"} {"...1":199,"metabolite":"L-Glutamic acid","KEGG":"C00025","module_id":"M00118","module_name":"Glutathione biosynthesis, glutamate => glutathione","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Other amino acid metabolism"} {"...1":200,"metabolite":"L-Glutamic acid","KEGG":"C00025","module_id":"M00121","module_name":"Heme biosynthesis, plants and bacteria, glutamate => heme","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":201,"metabolite":"L-Glutamic acid","KEGG":"C00025","module_id":"M00532","module_name":"Photorespiration","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Other carbohydrate metabolism"} {"...1":202,"metabolite":"L-Glutamic acid","KEGG":"C00025","module_id":"M00740","module_name":"Methylaspartate cycle","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Other carbohydrate metabolism"} {"...1":203,"metabolite":"L-Glutamic acid","KEGG":"C00025","module_id":"M00763","module_name":"Ornithine biosynthesis, mediated by LysW, glutamate => ornithine","upper_hierarchy":"Pathway 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{"...1":207,"metabolite":"L-Glutamine","KEGG":"C00064","module_id":"M00048","module_name":"De novo purine biosynthesis, PRPP + glutamine => IMP","upper_hierarchy":"Pathway modules","middle_hierarchy":"Nucleotide metabolism","lower_hierarchy":"Purine metabolism"} {"...1":208,"metabolite":"L-Glutamine","KEGG":"C00064","module_id":"M00051","module_name":"De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP","upper_hierarchy":"Pathway modules","middle_hierarchy":"Nucleotide metabolism","lower_hierarchy":"Pyrimidine metabolism"} {"...1":209,"metabolite":"L-Glutamine","KEGG":"C00064","module_id":"M00916","module_name":"Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":210,"metabolite":"Glutathione disulfide","KEGG":"C00127"} {"...1":211,"metabolite":"Glutathione","KEGG":"C00051","module_id":"M00118","module_name":"Glutathione biosynthesis, glutamate => glutathione","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Other amino acid metabolism"} {"...1":212,"metabolite":"L-Isoleucine","KEGG":"C00407","module_id":"M00019","module_name":"Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Branched-chain amino acid metabolism"} {"...1":213,"metabolite":"L-Isoleucine","KEGG":"C00407","module_id":"M00570","module_name":"Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Branched-chain amino acid metabolism"} {"...1":214,"metabolite":"L-Leucine","KEGG":"C00123","module_id":"M00036","module_name":"Leucine degradation, leucine => 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{"...1":218,"metabolite":"L-Lysine","KEGG":"C00047","module_id":"M00032","module_name":"Lysine degradation, lysine => saccharopine => acetoacetyl-CoA","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Lysine metabolism"} {"...1":219,"metabolite":"L-Lysine","KEGG":"C00047","module_id":"M00525","module_name":"Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Lysine metabolism"} {"...1":220,"metabolite":"L-Lysine","KEGG":"C00047","module_id":"M00526","module_name":"Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Lysine metabolism"} {"...1":221,"metabolite":"L-Lysine","KEGG":"C00047","module_id":"M00527","module_name":"Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine","upper_hierarchy":"Pathway 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{"...1":227,"metabolite":"L-Methionine","KEGG":"C00073","module_id":"M00017","module_name":"Methionine biosynthesis, aspartate => homoserine => methionine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Cysteine and methionine metabolism"} {"...1":228,"metabolite":"L-Methionine","KEGG":"C00073","module_id":"M00034","module_name":"Methionine salvage pathway","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Cysteine and methionine metabolism"} {"...1":229,"metabolite":"L-Methionine","KEGG":"C00073","module_id":"M00035","module_name":"Methionine degradation","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Cysteine and methionine metabolism"} {"...1":230,"metabolite":"L-Methionine","KEGG":"C00073","module_id":"M00368","module_name":"Ethylene biosynthesis, methionine => ethylene","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino 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{"...1":241,"metabolite":"L-Ornithine","KEGG":"C00077","module_id":"M00972","module_name":"Proline metabolism","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Arginine and proline metabolism"} {"...1":242,"metabolite":"L-Phenylalanine","KEGG":"C00079","module_id":"M00024","module_name":"Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Aromatic amino acid metabolism"} {"...1":246,"metabolite":"L-Phenylalanine","KEGG":"C00079","module_id":"M00910","module_name":"Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Aromatic amino acid metabolism"} {"...1":247,"metabolite":"L-Proline","KEGG":"C00148","module_id":"M00015","module_name":"Proline biosynthesis, glutamate => proline","upper_hierarchy":"Pathway 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{"...1":265,"metabolite":"L-Tryptophan","KEGG":"C00078","module_id":"M00023","module_name":"Tryptophan biosynthesis, chorismate => tryptophan","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Aromatic amino acid metabolism"} {"...1":266,"metabolite":"L-Tryptophan","KEGG":"C00078","module_id":"M00037","module_name":"Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Aromatic amino acid metabolism"} {"...1":267,"metabolite":"L-Tryptophan","KEGG":"C00078","module_id":"M00038","module_name":"Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Aromatic amino acid metabolism"} {"...1":276,"metabolite":"L-Tryptophan","KEGG":"C00078","module_id":"M00912","module_name":"NAD biosynthesis, tryptophan => quinolinate => 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{"...1":283,"metabolite":"L-Tyrosine","KEGG":"C00082","module_id":"M00042","module_name":"Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Aromatic amino acid metabolism"} {"...1":284,"metabolite":"L-Tyrosine","KEGG":"C00082","module_id":"M00043","module_name":"Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Aromatic amino acid metabolism"} {"...1":285,"metabolite":"L-Tyrosine","KEGG":"C00082","module_id":"M00044","module_name":"Tyrosine degradation, tyrosine => homogentisate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Aromatic amino acid metabolism"} {"...1":286,"metabolite":"L-Tyrosine","KEGG":"C00082","module_id":"M00127","module_name":"Thiamine biosynthesis, prokaryotes, AIR (+ 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{"...1":294,"metabolite":"L-Valine","KEGG":"C00183","module_id":"M00119","module_name":"Pantothenate biosynthesis, valine/L-aspartate => pantothenate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Metabolism of cofactors and vitamins","lower_hierarchy":"Cofactor and vitamin metabolism"} {"...1":297,"metabolite":"Lactic acid","KEGG":"C01432"} {"...1":298,"metabolite":"Malic acid","KEGG":"C00711"} {"...1":299,"metabolite":"N-Acetyl-L-aspartic acid","KEGG":"C01042"} {"...1":300,"metabolite":"Acetylcysteine","KEGG":"C06809"} {"...1":301,"metabolite":"N-Acetylputrescine","KEGG":"C02714","module_id":"M00135","module_name":"GABA biosynthesis, eukaryotes, putrescine => GABA","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Polyamine biosynthesis"} {"...1":302,"metabolite":"NAD+","KEGG":"C00003","module_id":"M00115","module_name":"NAD biosynthesis, aspartate => quinolinate => NAD","upper_hierarchy":"Pathway 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and vitamin metabolism"} {"...1":310,"metabolite":"NADH","KEGG":"C00004","module_id":"M00142","module_name":"NADH:ubiquinone oxidoreductase, mitochondria","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"ATP synthesis"} {"...1":311,"metabolite":"NADH","KEGG":"C00004","module_id":"M00144","module_name":"NADH:quinone oxidoreductase, prokaryotes","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"ATP synthesis"} {"...1":312,"metabolite":"NADH","KEGG":"C00004","module_id":"M00145","module_name":"NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"ATP synthesis"} {"...1":313,"metabolite":"NADP+","KEGG":"C00006"} {"...1":314,"metabolite":"NADPH","KEGG":"C00005"} {"...1":315,"metabolite":"O-Acetyl-L-carnitine","KEGG":"C02571"} {"...1":316,"metabolite":"Orotidine","KEGG":"C00438","module_id":"M00051","module_name":"De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP","upper_hierarchy":"Pathway modules","middle_hierarchy":"Nucleotide metabolism","lower_hierarchy":"Pyrimidine metabolism"} {"...1":317,"metabolite":"Orotidine","KEGG":"C00438","module_id":"M00051","module_name":"De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP","upper_hierarchy":"Pathway modules","middle_hierarchy":"Nucleotide metabolism","lower_hierarchy":"Pyrimidine metabolism"} {"...1":318,"metabolite":"Palmitic acid","KEGG":"C00249","module_id":"M00086","module_name":"beta-Oxidation, acyl-CoA synthesis","upper_hierarchy":"Pathway modules","middle_hierarchy":"Lipid metabolism","lower_hierarchy":"Fatty acid metabolism"} {"...1":319,"metabolite":"PEP","KEGG":"C00074","module_id":"M00001","module_name":"Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate 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{"...1":348,"metabolite":"Pyruvate","KEGG":"C00022","module_id":"M00374","module_name":"Dicarboxylate-hydroxybutyrate cycle","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Carbon fixation"} {"...1":349,"metabolite":"Pyruvate","KEGG":"C00022","module_id":"M00376","module_name":"3-Hydroxypropionate bi-cycle","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Carbon fixation"} {"...1":350,"metabolite":"Pyruvate","KEGG":"C00022","module_id":"M00535","module_name":"Isoleucine biosynthesis, pyruvate => 2-oxobutanoate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Branched-chain amino acid metabolism"} {"...1":352,"metabolite":"Pyruvate","KEGG":"C00022","module_id":"M00620","module_name":"Incomplete reductive citrate cycle, acetyl-CoA => oxoglutarate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"Carbon 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{"...1":368,"metabolite":"Succinate","KEGG":"C00042","module_id":"M00011","module_name":"Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate","upper_hierarchy":"Pathway modules","middle_hierarchy":"Carbohydrate metabolism","lower_hierarchy":"Central carbohydrate metabolism"} {"...1":369,"metabolite":"Succinate","KEGG":"C00042","module_id":"M00027","module_name":"GABA (gamma-Aminobutyrate) shunt","upper_hierarchy":"Pathway modules","middle_hierarchy":"Amino acid metabolism","lower_hierarchy":"Other amino acid metabolism"} {"...1":370,"metabolite":"Succinate","KEGG":"C00042","module_id":"M00148","module_name":"Succinate dehydrogenase (ubiquinone)","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy metabolism","lower_hierarchy":"ATP synthesis"} {"...1":371,"metabolite":"Succinate","KEGG":"C00042","module_id":"M00149","module_name":"Succinate dehydrogenase, prokaryotes","upper_hierarchy":"Pathway modules","middle_hierarchy":"Energy 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