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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "MetaPathNet" in publications use:'
type: software
license: MIT
title: 'MetaPathNet: KEGG-Based Metabolic and Signaling Network Analysis for Systems
  Biology'
version: 0.99.5
doi: 10.32614/CRAN.package.MetaPathNet
abstract: Provides tools to construct KEGG-based metabolic and signaling networks
  as edge lists for single-organism or cross-species analyses. The package supports
  identifier mapping, shortest-path and topology analyses, community detection, permutation
  testing, pathway over-representation analysis, and node annotation for host-microbiome
  studies. It also provides network visualisation in R and Cytoscape and supports
  extension of KEGG-based networks through additional reaction resources and user-defined
  reactions.
authors:
- family-names: Wang
  given-names: Zhaojie
  email: zhaojie.wang@cnrs.fr
  orcid: https://orcid.org/0009-0009-7191-2107
- family-names: Puig-Castellvi
  given-names: Francesc
- family-names: Jia
  given-names: Manyi
- family-names: Dumas
  given-names: Marc-Emmanuel
repository: https://bioc.r-universe.dev
repository-code: https://github.com/zhaojie-wang/MetaPathNet
commit: fdaae4de76d724123116933a9d97d8684b9bebf1
url: https://github.com/zhaojie-wang/MetaPathNet
date-released: '2026-07-28'
contact:
- family-names: Wang
  given-names: Zhaojie
  email: zhaojie.wang@cnrs.fr
  orcid: https://orcid.org/0009-0009-7191-2107