To cite MeLSI in publications use:

Bresette N, Ericsson AC, Woods C, Lin A-L (2025). MeLSI: Metric Learning for Statistical Inference in Microbiome Analysis. R package version 0.99.0, https://github.com/NathanBresette/MeLSI,<doi:10.5281/zenodo.17714848>.

Bresette N, Ericsson AC, Woods C, Lin A-L (2025). MeLSI: Metric Learning for Statistical Inference in Microbiome Community Composition Analysis. bioRxiv,<doi:10.64898/2025.12.04.692328>.

Corresponding BibTeX entries:

  @Manual{,
    title = {MeLSI: Metric Learning for Statistical Inference in
      Microbiome Analysis},
    author = {Nathan Bresette and Aaron C. Ericsson and Carter Woods
      and Ai-Ling Lin},
    year = {2025},
    note = {R package version 0.99.0},
    url = {https://github.com/NathanBresette/MeLSI},
    doi = {10.5281/zenodo.17714848},
  }

  @Article{,
    title = {MeLSI: Metric Learning for Statistical Inference in
      Microbiome Community Composition Analysis},
    author = {Nathan Bresette and Aaron C. Ericsson and Carter Woods
      and Ai-Ling Lin},
    year = {2025},
    journal = {bioRxiv},
    doi = {10.64898/2025.12.04.692328},
    url = {https://doi.org/10.64898/2025.12.04.692328},
    note = {Preprint},
  }