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{"Sequence":"ADEASELACPTPK","Length":13,"Modifications":"Phospho (STY)","Modified.sequence":"_ADEASELACPT(Phospho (STY))PK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"ADEASELACPT(1)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"ADEAS(-69)ELACPT(69)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P49327","Leading.proteins":"P49327","Leading.razor.protein":"P49327","Gene.names":"FASN","Protein.names":"Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_3","Fraction":3,"Experiment":"MS2","MS.MS.m.z":963.96906,"Charge":2,"m.z":734.80491,"Mass":1467.59528,"Uncalibrated...Calibrated.m.z..ppm.":1.8264,"Uncalibrated...Calibrated.m.z..Da.":0.00134,"Mass.error..ppm.":311870,"Mass.error..Da.":229.16,"Uncalibrated.mass.error..ppm.":311870,"Uncalibrated.mass.error..Da.":229.16,"Max.intensity.m.z.0":964.46899,"Retention.time":71.147,"Retention.length":0.27986,"Calibrated.retention.time":71.147,"Calibrated.retention.time.start":71,"Calibrated.retention.time.finish":71.28,"Retention.time.calibration":0,"Number.of.data.points":16,"Number.of.scans":10,"Number.of.isotopic.peaks":2,"PIF":1,"Fraction.of.total.spectrum":0.00007,"Base.peak.fraction":0.00074,"PEP":1.6407e-08,"MS.MS.count":1,"MS.MS.scan.number":21578,"Score":139.46,"Delta.score":98.411,"Combinatorics":2,"Intensity":4269700,"Reporter.intensity.corrected.1":42860,"Reporter.intensity.corrected.2":48344,"Reporter.intensity.corrected.3":38549,"Reporter.intensity.corrected.4":47132,"Reporter.intensity.corrected.5":41258,"Reporter.intensity.corrected.6":42597,"Reporter.intensity.corrected.7":54936,"Reporter.intensity.corrected.8":55815,"Reporter.intensity.corrected.9":63746,"Reporter.intensity.corrected.10":47426,"Reporter.intensity.1":42860,"Reporter.intensity.2":48344,"Reporter.intensity.3":38549,"Reporter.intensity.4":47132,"Reporter.intensity.5":41258,"Reporter.intensity.6":42597,"Reporter.intensity.7":54936,"Reporter.intensity.8":55815,"Reporter.intensity.9":63746,"Reporter.intensity.10":47426,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":278,"Protein.group.IDs":"1122","Peptide.ID":85,"Mod..peptide.ID":103,"MS.MS.IDs":"330","Best.MS.MS":330,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"2005;6336"}
{"Sequence":"ADEASELACPTPK","Length":13,"Modifications":"Phospho (STY)","Modified.sequence":"_ADEAS(Phospho (STY))ELACPTPK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"ADEAS(1)ELACPTPK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"ADEAS(37)ELACPT(-37)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P49327","Leading.proteins":"P49327","Leading.razor.protein":"P49327","Gene.names":"FASN","Protein.names":"Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_3","Fraction":3,"Experiment":"MS2","MS.MS.m.z":642.98206,"Charge":3,"m.z":490.2057,"Mass":1467.59528,"Uncalibrated...Calibrated.m.z..ppm.":1.8599,"Uncalibrated...Calibrated.m.z..Da.":0.00091,"Mass.error..ppm.":311660,"Mass.error..Da.":152.78,"Uncalibrated.mass.error..ppm.":311660,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":642.98106,"Retention.time":73.404,"Retention.length":0.36971,"Calibrated.retention.time":73.404,"Calibrated.retention.time.start":73.185,"Calibrated.retention.time.finish":73.554,"Retention.time.calibration":0,"Number.of.data.points":43,"Number.of.scans":14,"Number.of.isotopic.peaks":4,"PIF":0.8955,"Fraction.of.total.spectrum":0.00138,"Base.peak.fraction":0.01654,"PEP":0.00131,"MS.MS.count":1,"MS.MS.scan.number":22462,"Score":66.568,"Delta.score":59.839,"Combinatorics":2,"Intensity":15185000,"Reporter.intensity.corrected.1":60191,"Reporter.intensity.corrected.2":63714,"Reporter.intensity.corrected.3":53642,"Reporter.intensity.corrected.4":54818,"Reporter.intensity.corrected.5":63110,"Reporter.intensity.corrected.6":63004,"Reporter.intensity.corrected.7":46303,"Reporter.intensity.corrected.8":59736,"Reporter.intensity.corrected.9":70194,"Reporter.intensity.corrected.10":66666,"Reporter.intensity.1":60191,"Reporter.intensity.2":63714,"Reporter.intensity.3":53642,"Reporter.intensity.4":54818,"Reporter.intensity.5":63110,"Reporter.intensity.6":63004,"Reporter.intensity.7":46303,"Reporter.intensity.8":59736,"Reporter.intensity.9":70194,"Reporter.intensity.10":66666,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":279,"Protein.group.IDs":"1122","Peptide.ID":85,"Mod..peptide.ID":103,"MS.MS.IDs":"331","Best.MS.MS":331,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"2005;6336"}
{"Sequence":"AEDGATPSPSNETPK","Length":15,"Modifications":"Phospho (STY)","Modified.sequence":"_AEDGATPSPSNET(Phospho (STY))PK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"AEDGATPSPSNET(1)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"AEDGAT(-79)PS(-65)PS(-35)NET(35)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":680.33051,"Charge":3,"m.z":527.55405,"Mass":1579.64031,"Uncalibrated...Calibrated.m.z..ppm.":2.2387,"Uncalibrated...Calibrated.m.z..Da.":0.00118,"Mass.error..ppm.":289590,"Mass.error..Da.":152.78,"Uncalibrated.mass.error..ppm.":289590,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":680.3293,"Retention.time":49.466,"Retention.length":0.46302,"Calibrated.retention.time":49.466,"Calibrated.retention.time.start":49.252,"Calibrated.retention.time.finish":49.715,"Retention.time.calibration":0,"Number.of.data.points":67,"Number.of.scans":19,"Number.of.isotopic.peaks":4,"PIF":0.88615,"Fraction.of.total.spectrum":0.0064,"Base.peak.fraction":0.03523,"PEP":7.0223e-11,"MS.MS.count":1,"MS.MS.scan.number":13184,"Score":119.48,"Delta.score":102.19,"Combinatorics":4,"Intensity":28934000,"Reporter.intensity.corrected.1":73274,"Reporter.intensity.corrected.2":81812,"Reporter.intensity.corrected.3":67582,"Reporter.intensity.corrected.4":87239,"Reporter.intensity.corrected.5":77253,"Reporter.intensity.corrected.6":73009,"Reporter.intensity.corrected.7":83989,"Reporter.intensity.corrected.8":79730,"Reporter.intensity.corrected.9":94703,"Reporter.intensity.corrected.10":81108,"Reporter.intensity.1":73274,"Reporter.intensity.2":81812,"Reporter.intensity.3":67582,"Reporter.intensity.4":87239,"Reporter.intensity.5":77253,"Reporter.intensity.6":73009,"Reporter.intensity.7":83989,"Reporter.intensity.8":79730,"Reporter.intensity.9":94703,"Reporter.intensity.10":81108,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":423,"Protein.group.IDs":"698","Peptide.ID":128,"Mod..peptide.ID":155,"MS.MS.IDs":"507","Best.MS.MS":507,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1204;1205;6151;6152"}
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{"Sequence":"ALSSLHGDDQDSEDEVLTIPEVK","Length":23,"Modifications":"Phospho (STY)","Modified.sequence":"_ALSSLHGDDQDS(Phospho (STY))EDEVLTIPEVK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"ALSSLHGDDQDS(1)EDEVLTIPEVK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"ALS(-71)S(-63)LHGDDQDS(43)EDEVLT(-43)IPEVK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P11717","Leading.proteins":"P11717","Leading.razor.protein":"P11717","Gene.names":"IGF2R","Protein.names":"Cation-independent mannose-6-phosphate receptor","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_2","Fraction":2,"Experiment":"MS2","MS.MS.m.z":1012.83612,"Charge":3,"m.z":859.72497,"Mass":2576.15309,"Uncalibrated...Calibrated.m.z..ppm.":1.7993,"Uncalibrated...Calibrated.m.z..Da.":0.00155,"Mass.error..ppm.":177700,"Mass.error..Da.":152.78,"Uncalibrated.mass.error..ppm.":177700,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":1012.83464,"Retention.time":114.97,"Retention.length":1.2304,"Calibrated.retention.time":114.97,"Calibrated.retention.time.start":114.7,"Calibrated.retention.time.finish":115.93,"Retention.time.calibration":0,"Number.of.data.points":219,"Number.of.scans":56,"Number.of.isotopic.peaks":5,"PIF":0.98044,"Fraction.of.total.spectrum":0.00306,"Base.peak.fraction":0.04419,"PEP":5.9632e-56,"MS.MS.count":1,"MS.MS.scan.number":38251,"Score":194.21,"Delta.score":186.88,"Combinatorics":4,"Intensity":60177000,"Reporter.intensity.corrected.1":68360,"Reporter.intensity.corrected.2":68793,"Reporter.intensity.corrected.3":62018,"Reporter.intensity.corrected.4":51676,"Reporter.intensity.corrected.5":65418,"Reporter.intensity.corrected.6":73216,"Reporter.intensity.corrected.7":71522,"Reporter.intensity.corrected.8":70404,"Reporter.intensity.corrected.9":80315,"Reporter.intensity.corrected.10":68548,"Reporter.intensity.1":68360,"Reporter.intensity.2":68793,"Reporter.intensity.3":62018,"Reporter.intensity.4":51676,"Reporter.intensity.5":65418,"Reporter.intensity.6":73216,"Reporter.intensity.7":71522,"Reporter.intensity.8":70404,"Reporter.intensity.9":80315,"Reporter.intensity.10":68548,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":844,"Protein.group.IDs":"456","Peptide.ID":271,"Mod..peptide.ID":316,"MS.MS.IDs":"988","Best.MS.MS":988,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"776"}
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{"Sequence":"ALSSLHGDDQDSEDEVLTIPEVK","Length":23,"Modifications":"Phospho (STY)","Modified.sequence":"_ALSSLHGDDQDS(Phospho (STY))EDEVLTIPEVK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"ALSSLHGDDQDS(1)EDEVLTIPEVK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"ALS(-52)S(-52)LHGDDQDS(52)EDEVLT(-74)IPEVK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P11717","Leading.proteins":"P11717","Leading.razor.protein":"P11717","Gene.names":"IGF2R","Protein.names":"Cation-independent mannose-6-phosphate receptor","Type":"MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_3","Fraction":3,"Experiment":"MS2","MS.MS.m.z":1012.5025,"Charge":3,"m.z":859.72497,"Mass":2576.15309,"Retention.time":117.12,"Retention.length":1,"Calibrated.retention.time":117.12,"Calibrated.retention.time.start":116.62,"Calibrated.retention.time.finish":117.62,"Retention.time.calibration":0,"PEP":5.8918e-38,"MS.MS.count":1,"MS.MS.scan.number":39066,"Score":138.71,"Delta.score":122.4,"Combinatorics":4,"Reporter.intensity.corrected.1":0,"Reporter.intensity.corrected.2":0,"Reporter.intensity.corrected.3":0,"Reporter.intensity.corrected.4":0,"Reporter.intensity.corrected.5":0,"Reporter.intensity.corrected.6":0,"Reporter.intensity.corrected.7":0,"Reporter.intensity.corrected.8":0,"Reporter.intensity.corrected.9":0,"Reporter.intensity.corrected.10":0,"Reporter.intensity.1":0,"Reporter.intensity.2":0,"Reporter.intensity.3":0,"Reporter.intensity.4":0,"Reporter.intensity.5":0,"Reporter.intensity.6":0,"Reporter.intensity.7":0,"Reporter.intensity.8":0,"Reporter.intensity.9":0,"Reporter.intensity.10":0,"Reporter.intensity.count.1":0,"Reporter.intensity.count.2":0,"Reporter.intensity.count.3":0,"Reporter.intensity.count.4":0,"Reporter.intensity.count.5":0,"Reporter.intensity.count.6":0,"Reporter.intensity.count.7":0,"Reporter.intensity.count.8":0,"Reporter.intensity.count.9":0,"Reporter.intensity.count.10":0,"Reverse":"","Potential.contaminant":"","id":847,"Protein.group.IDs":"456","Peptide.ID":271,"Mod..peptide.ID":316,"MS.MS.IDs":"993","Best.MS.MS":993,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"776"}
{"Sequence":"EAGEGGEAEAPAAEGGK","Length":17,"Modifications":"Unmodified","Modified.sequence":"_EAGEGGEAEAPAAEGGK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":0,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":994.50415,"Charge":2,"m.z":765.33935,"Mass":1528.66414,"Uncalibrated...Calibrated.m.z..ppm.":2.7376,"Uncalibrated...Calibrated.m.z..Da.":0.0021,"Mass.error..ppm.":299430,"Mass.error..Da.":229.16,"Uncalibrated.mass.error..ppm.":299430,"Uncalibrated.mass.error..Da.":229.17,"Max.intensity.m.z.0":994.50273,"Retention.time":47.599,"Retention.length":0.14793,"Calibrated.retention.time":47.599,"Calibrated.retention.time.start":47.546,"Calibrated.retention.time.finish":47.693,"Retention.time.calibration":0,"Number.of.data.points":8,"Number.of.scans":5,"Number.of.isotopic.peaks":2,"PIF":0.88103,"Fraction.of.total.spectrum":0.00011,"Base.peak.fraction":0.00117,"PEP":0.00039,"MS.MS.count":1,"MS.MS.scan.number":12501,"Score":112.51,"Delta.score":82.448,"Combinatorics":1,"Intensity":1957800,"Reporter.intensity.corrected.1":23384,"Reporter.intensity.corrected.2":26450,"Reporter.intensity.corrected.3":33341,"Reporter.intensity.corrected.4":22335,"Reporter.intensity.corrected.5":27212,"Reporter.intensity.corrected.6":32035,"Reporter.intensity.corrected.7":28684,"Reporter.intensity.corrected.8":24194,"Reporter.intensity.corrected.9":33659,"Reporter.intensity.corrected.10":29612,"Reporter.intensity.1":23384,"Reporter.intensity.2":26450,"Reporter.intensity.3":33341,"Reporter.intensity.4":22335,"Reporter.intensity.5":27212,"Reporter.intensity.6":32035,"Reporter.intensity.7":28684,"Reporter.intensity.8":24194,"Reporter.intensity.9":33659,"Reporter.intensity.10":29612,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":3119,"Protein.group.IDs":"698","Peptide.ID":1009,"Mod..peptide.ID":1150,"MS.MS.IDs":"3616","Best.MS.MS":3616,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":""}
{"Sequence":"EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK","Length":32,"Modifications":"Phospho (STY)","Modified.sequence":"_EAPAEGEAAEPGSPTAAEGEAASAAS(Phospho (STY))STSSPK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EAPAEGEAAEPGSPTAAEGEAAS(0.124)AAS(0.431)S(0.356)T(0.071)S(0.015)S(0.003)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EAPAEGEAAEPGS(-32)PT(-32)AAEGEAAS(-5.4)AAS(0.84)S(-0.84)T(-7.8)S(-15)S(-21)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":864.40979,"Charge":4,"m.z":749.57266,"Mass":2994.26153,"Uncalibrated...Calibrated.m.z..ppm.":2.1116,"Uncalibrated...Calibrated.m.z..Da.":0.00158,"Mass.error..ppm.":152860,"Mass.error..Da.":114.58,"Uncalibrated.mass.error..ppm.":152860,"Uncalibrated.mass.error..Da.":114.58,"Max.intensity.m.z.0":864.40534,"Retention.time":73.115,"Retention.length":0.75614,"Calibrated.retention.time":73.115,"Calibrated.retention.time.start":72.75,"Calibrated.retention.time.finish":73.506,"Retention.time.calibration":0,"Number.of.data.points":75,"Number.of.scans":29,"Number.of.isotopic.peaks":4,"PIF":0.6139,"Fraction.of.total.spectrum":0.00091,"Base.peak.fraction":0.00823,"PEP":1.1276e-09,"MS.MS.count":2,"MS.MS.scan.number":22068,"Score":89.823,"Delta.score":74.304,"Combinatorics":8,"Intensity":15721000,"Reporter.intensity.corrected.1":24178,"Reporter.intensity.corrected.2":35373,"Reporter.intensity.corrected.3":42816,"Reporter.intensity.corrected.4":27533,"Reporter.intensity.corrected.5":38403,"Reporter.intensity.corrected.6":47607,"Reporter.intensity.corrected.7":29747,"Reporter.intensity.corrected.8":43185,"Reporter.intensity.corrected.9":52774,"Reporter.intensity.corrected.10":37942,"Reporter.intensity.1":24178,"Reporter.intensity.2":35373,"Reporter.intensity.3":42816,"Reporter.intensity.4":27533,"Reporter.intensity.5":38403,"Reporter.intensity.6":47607,"Reporter.intensity.7":29747,"Reporter.intensity.8":43185,"Reporter.intensity.9":52774,"Reporter.intensity.10":37942,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":3140,"Protein.group.IDs":"698","Peptide.ID":1018,"Mod..peptide.ID":1160,"MS.MS.IDs":"3638;3639","Best.MS.MS":3639,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1206;1207;1208;1209;1210;6153;6154"}
{"Sequence":"EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK","Length":32,"Modifications":"Phospho (STY)","Modified.sequence":"_EAPAEGEAAEPGSPTAAEGEAASAASSTS(Phospho (STY))SPK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EAPAEGEAAEPGSPTAAEGEAAS(0.002)AAS(0.01)S(0.008)T(0.238)S(0.595)S(0.147)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EAPAEGEAAEPGS(-41)PT(-41)AAEGEAAS(-26)AAS(-18)S(-19)T(-4)S(4)S(-6.1)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":864.40558,"Charge":4,"m.z":749.57266,"Mass":2994.26153,"Uncalibrated...Calibrated.m.z..ppm.":2.3437,"Uncalibrated...Calibrated.m.z..Da.":0.00176,"Mass.error..ppm.":152860,"Mass.error..Da.":114.58,"Uncalibrated.mass.error..ppm.":152870,"Uncalibrated.mass.error..Da.":114.58,"Max.intensity.m.z.0":864.40521,"Retention.time":75.539,"Retention.length":0.79932,"Calibrated.retention.time":75.539,"Calibrated.retention.time.start":75.045,"Calibrated.retention.time.finish":75.844,"Retention.time.calibration":0,"Number.of.data.points":147,"Number.of.scans":32,"Number.of.isotopic.peaks":6,"PIF":0.92935,"Fraction.of.total.spectrum":0.00166,"Base.peak.fraction":0.00162,"PEP":5.7993e-13,"MS.MS.count":2,"MS.MS.scan.number":22917,"Score":92.967,"Delta.score":77.448,"Combinatorics":8,"Intensity":76318000,"Reporter.intensity.corrected.1":73029,"Reporter.intensity.corrected.2":75598,"Reporter.intensity.corrected.3":91198,"Reporter.intensity.corrected.4":79476,"Reporter.intensity.corrected.5":97488,"Reporter.intensity.corrected.6":107660,"Reporter.intensity.corrected.7":90296,"Reporter.intensity.corrected.8":90344,"Reporter.intensity.corrected.9":119440,"Reporter.intensity.corrected.10":101600,"Reporter.intensity.1":73029,"Reporter.intensity.2":75598,"Reporter.intensity.3":91198,"Reporter.intensity.4":79476,"Reporter.intensity.5":97488,"Reporter.intensity.6":107660,"Reporter.intensity.7":90296,"Reporter.intensity.8":90344,"Reporter.intensity.9":119440,"Reporter.intensity.10":101600,"Reporter.intensity.count.1":2,"Reporter.intensity.count.2":2,"Reporter.intensity.count.3":2,"Reporter.intensity.count.4":2,"Reporter.intensity.count.5":2,"Reporter.intensity.count.6":2,"Reporter.intensity.count.7":2,"Reporter.intensity.count.8":2,"Reporter.intensity.count.9":2,"Reporter.intensity.count.10":2,"Reverse":"","Potential.contaminant":"","id":3141,"Protein.group.IDs":"698","Peptide.ID":1018,"Mod..peptide.ID":1160,"MS.MS.IDs":"3640;3641","Best.MS.MS":3641,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1206;1207;1208;1209;1210;6153;6154"}
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{"Sequence":"EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK","Length":32,"Modifications":"Phospho (STY)","Modified.sequence":"_EAPAEGEAAEPGS(Phospho (STY))PTAAEGEAASAASSTSSPK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EAPAEGEAAEPGS(0.357)PT(0.357)AAEGEAAS(0.129)AAS(0.041)S(0.047)T(0.054)S(0.013)S(0.003)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EAPAEGEAAEPGS(0)PT(0)AAEGEAAS(-4.4)AAS(-9.4)S(-8.8)T(-8.2)S(-14)S(-20)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":864.40442,"Charge":4,"m.z":749.57266,"Mass":2994.26153,"Uncalibrated...Calibrated.m.z..ppm.":2.2665,"Uncalibrated...Calibrated.m.z..Da.":0.0017,"Mass.error..ppm.":152860,"Mass.error..Da.":114.58,"Uncalibrated.mass.error..ppm.":152860,"Uncalibrated.mass.error..Da.":114.58,"Max.intensity.m.z.0":864.40494,"Retention.time":80.477,"Retention.length":0.88609,"Calibrated.retention.time":80.477,"Calibrated.retention.time.start":80.013,"Calibrated.retention.time.finish":80.9,"Retention.time.calibration":0,"Number.of.data.points":157,"Number.of.scans":33,"Number.of.isotopic.peaks":6,"PIF":0.59009,"Fraction.of.total.spectrum":0.00442,"Base.peak.fraction":0.04496,"PEP":0.00065,"MS.MS.count":1,"MS.MS.scan.number":24867,"Score":50.583,"Delta.score":35.766,"Combinatorics":8,"Intensity":90709000,"Reporter.intensity.corrected.1":0,"Reporter.intensity.corrected.2":0,"Reporter.intensity.corrected.3":0,"Reporter.intensity.corrected.4":0,"Reporter.intensity.corrected.5":0,"Reporter.intensity.corrected.6":0,"Reporter.intensity.corrected.7":0,"Reporter.intensity.corrected.8":0,"Reporter.intensity.corrected.9":0,"Reporter.intensity.corrected.10":0,"Reporter.intensity.1":0,"Reporter.intensity.2":0,"Reporter.intensity.3":0,"Reporter.intensity.4":0,"Reporter.intensity.5":0,"Reporter.intensity.6":0,"Reporter.intensity.7":0,"Reporter.intensity.8":0,"Reporter.intensity.9":0,"Reporter.intensity.10":0,"Reporter.intensity.count.1":0,"Reporter.intensity.count.2":0,"Reporter.intensity.count.3":0,"Reporter.intensity.count.4":0,"Reporter.intensity.count.5":0,"Reporter.intensity.count.6":0,"Reporter.intensity.count.7":0,"Reporter.intensity.count.8":0,"Reporter.intensity.count.9":0,"Reporter.intensity.count.10":0,"Reverse":"","Potential.contaminant":"","id":3143,"Protein.group.IDs":"698","Peptide.ID":1018,"Mod..peptide.ID":1160,"MS.MS.IDs":"3644","Best.MS.MS":3644,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1206;1207;1208;1209;1210;6153;6154"}
{"Sequence":"EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK","Length":32,"Modifications":"Phospho (STY)","Modified.sequence":"_EAPAEGEAAEPGSPT(Phospho (STY))AAEGEAASAASSTSSPK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EAPAEGEAAEPGS(0.111)PT(0.887)AAEGEAAS(0.002)AASSTSSPK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EAPAEGEAAEPGS(-9)PT(9)AAEGEAAS(-26)AAS(-37)S(-44)T(-50)S(-56)S(-61)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":1152.20618,"Charge":3,"m.z":999.09445,"Mass":2994.26153,"Uncalibrated...Calibrated.m.z..ppm.":2.1136,"Uncalibrated...Calibrated.m.z..Da.":0.00211,"Mass.error..ppm.":152910,"Mass.error..Da.":152.78,"Uncalibrated.mass.error..ppm.":152920,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":1152.53854,"Retention.time":80.484,"Retention.length":0.65729,"Calibrated.retention.time":80.484,"Calibrated.retention.time.start":80.189,"Calibrated.retention.time.finish":80.846,"Retention.time.calibration":0,"Number.of.data.points":83,"Number.of.scans":24,"Number.of.isotopic.peaks":5,"PIF":0.9546,"Fraction.of.total.spectrum":0.00106,"Base.peak.fraction":0.0068,"PEP":1.2177e-18,"MS.MS.count":1,"MS.MS.scan.number":24918,"Score":106.81,"Delta.score":90.919,"Combinatorics":8,"Intensity":15667000,"Reporter.intensity.corrected.1":27892,"Reporter.intensity.corrected.2":24050,"Reporter.intensity.corrected.3":23655,"Reporter.intensity.corrected.4":22829,"Reporter.intensity.corrected.5":22551,"Reporter.intensity.corrected.6":28177,"Reporter.intensity.corrected.7":25181,"Reporter.intensity.corrected.8":26757,"Reporter.intensity.corrected.9":22073,"Reporter.intensity.corrected.10":28024,"Reporter.intensity.1":27892,"Reporter.intensity.2":24050,"Reporter.intensity.3":23655,"Reporter.intensity.4":22829,"Reporter.intensity.5":22551,"Reporter.intensity.6":28177,"Reporter.intensity.7":25181,"Reporter.intensity.8":26757,"Reporter.intensity.9":22073,"Reporter.intensity.10":28024,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":3144,"Protein.group.IDs":"698","Peptide.ID":1018,"Mod..peptide.ID":1160,"MS.MS.IDs":"3645","Best.MS.MS":3645,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1206;1207;1208;1209;1210;6153;6154"}
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{"Sequence":"EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK","Length":32,"Modifications":"Phospho (STY)","Modified.sequence":"_EAPAEGEAAEPGSPTAAEGEAASAASSTS(Phospho (STY))SPK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EAPAEGEAAEPGSPTAAEGEAASAAS(0.001)S(0.012)T(0.156)S(0.676)S(0.155)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EAPAEGEAAEPGS(-55)PT(-45)AAEGEAAS(-33)AAS(-29)S(-17)T(-6.4)S(6.4)S(-6.4)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_2","Fraction":2,"Experiment":"MS2","MS.MS.m.z":864.65875,"Charge":4,"m.z":749.57266,"Mass":2994.26153,"Uncalibrated...Calibrated.m.z..ppm.":2.4851,"Uncalibrated...Calibrated.m.z..Da.":0.00186,"Mass.error..ppm.":152860,"Mass.error..Da.":114.58,"Uncalibrated.mass.error..ppm.":152860,"Uncalibrated.mass.error..Da.":114.58,"Max.intensity.m.z.0":864.40481,"Retention.time":74.98,"Retention.length":0.85254,"Calibrated.retention.time":74.98,"Calibrated.retention.time.start":74.493,"Calibrated.retention.time.finish":75.346,"Retention.time.calibration":0,"Number.of.data.points":165,"Number.of.scans":34,"Number.of.isotopic.peaks":7,"PIF":0.95916,"Fraction.of.total.spectrum":0.00122,"Base.peak.fraction":0.00385,"PEP":6.9079e-19,"MS.MS.count":1,"MS.MS.scan.number":23045,"Score":110.3,"Delta.score":95.019,"Combinatorics":8,"Intensity":80185000,"Reporter.intensity.corrected.1":60205,"Reporter.intensity.corrected.2":46924,"Reporter.intensity.corrected.3":38841,"Reporter.intensity.corrected.4":53882,"Reporter.intensity.corrected.5":43765,"Reporter.intensity.corrected.6":46759,"Reporter.intensity.corrected.7":50046,"Reporter.intensity.corrected.8":44353,"Reporter.intensity.corrected.9":47750,"Reporter.intensity.corrected.10":38914,"Reporter.intensity.1":60205,"Reporter.intensity.2":46924,"Reporter.intensity.3":38841,"Reporter.intensity.4":53882,"Reporter.intensity.5":43765,"Reporter.intensity.6":46759,"Reporter.intensity.7":50046,"Reporter.intensity.8":44353,"Reporter.intensity.9":47750,"Reporter.intensity.10":38914,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":3146,"Protein.group.IDs":"698","Peptide.ID":1018,"Mod..peptide.ID":1160,"MS.MS.IDs":"3648","Best.MS.MS":3648,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1206;1207;1208;1209;1210;6153;6154"}
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{"Sequence":"EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK","Length":32,"Modifications":"Phospho (STY)","Modified.sequence":"_EAPAEGEAAEPGSPTAAEGEAASAAS(Phospho (STY))STSSPK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EAPAEGEAAEPGSPTAAEGEAAS(0.009)AAS(0.488)S(0.385)T(0.094)S(0.019)S(0.004)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EAPAEGEAAEPGS(-37)PT(-37)AAEGEAAS(-17)AAS(1)S(-1)T(-7.2)S(-14)S(-21)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_3","Fraction":3,"Experiment":"MS2","MS.MS.m.z":864.40692,"Charge":4,"m.z":749.57266,"Mass":2994.26153,"Uncalibrated...Calibrated.m.z..ppm.":1.5846,"Uncalibrated...Calibrated.m.z..Da.":0.00119,"Mass.error..ppm.":152860,"Mass.error..Da.":114.58,"Uncalibrated.mass.error..ppm.":152860,"Uncalibrated.mass.error..Da.":114.58,"Max.intensity.m.z.0":864.65547,"Retention.time":72.869,"Retention.length":0.76515,"Calibrated.retention.time":72.869,"Calibrated.retention.time.start":72.624,"Calibrated.retention.time.finish":73.389,"Retention.time.calibration":0,"Number.of.data.points":97,"Number.of.scans":28,"Number.of.isotopic.peaks":4,"PIF":0.95701,"Fraction.of.total.spectrum":0.00225,"Base.peak.fraction":0.02263,"PEP":4.6489e-13,"MS.MS.count":2,"MS.MS.scan.number":22201,"Score":95.507,"Delta.score":79.988,"Combinatorics":8,"Intensity":25741000,"Reporter.intensity.corrected.1":42160,"Reporter.intensity.corrected.2":64992,"Reporter.intensity.corrected.3":48417,"Reporter.intensity.corrected.4":55082,"Reporter.intensity.corrected.5":42579,"Reporter.intensity.corrected.6":52854,"Reporter.intensity.corrected.7":50943,"Reporter.intensity.corrected.8":57714,"Reporter.intensity.corrected.9":57614,"Reporter.intensity.corrected.10":58443,"Reporter.intensity.1":42160,"Reporter.intensity.2":64992,"Reporter.intensity.3":48417,"Reporter.intensity.4":55082,"Reporter.intensity.5":42579,"Reporter.intensity.6":52854,"Reporter.intensity.7":50943,"Reporter.intensity.8":57714,"Reporter.intensity.9":57614,"Reporter.intensity.10":58443,"Reporter.intensity.count.1":2,"Reporter.intensity.count.2":2,"Reporter.intensity.count.3":2,"Reporter.intensity.count.4":2,"Reporter.intensity.count.5":2,"Reporter.intensity.count.6":2,"Reporter.intensity.count.7":2,"Reporter.intensity.count.8":2,"Reporter.intensity.count.9":2,"Reporter.intensity.count.10":2,"Reverse":"","Potential.contaminant":"","id":3149,"Protein.group.IDs":"698","Peptide.ID":1018,"Mod..peptide.ID":1160,"MS.MS.IDs":"3651;3652","Best.MS.MS":3652,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1206;1207;1208;1209;1210;6153;6154"}
{"Sequence":"EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK","Length":32,"Modifications":"Phospho (STY)","Modified.sequence":"_EAPAEGEAAEPGSPTAAEGEAASAASSTS(Phospho (STY))SPK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EAPAEGEAAEPGSPTAAEGEAAS(0.002)AAS(0.004)S(0.006)T(0.076)S(0.729)S(0.182)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EAPAEGEAAEPGS(-38)PT(-38)AAEGEAAS(-26)AAS(-22)S(-21)T(-9.8)S(6)S(-6)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_3","Fraction":3,"Experiment":"MS2","MS.MS.m.z":864.65796,"Charge":4,"m.z":749.57266,"Mass":2994.26153,"Uncalibrated...Calibrated.m.z..ppm.":1.6428,"Uncalibrated...Calibrated.m.z..Da.":0.00123,"Mass.error..ppm.":152860,"Mass.error..Da.":114.58,"Uncalibrated.mass.error..ppm.":152860,"Uncalibrated.mass.error..Da.":114.58,"Max.intensity.m.z.0":864.40477,"Retention.time":75.447,"Retention.length":0.84431,"Calibrated.retention.time":75.447,"Calibrated.retention.time.start":74.897,"Calibrated.retention.time.finish":75.741,"Retention.time.calibration":0,"Number.of.data.points":157,"Number.of.scans":33,"Number.of.isotopic.peaks":6,"PIF":0.95843,"Fraction.of.total.spectrum":0.00153,"Base.peak.fraction":0.00487,"PEP":9.044e-10,"MS.MS.count":1,"MS.MS.scan.number":23098,"Score":90.287,"Delta.score":71.407,"Combinatorics":8,"Intensity":101610000,"Reporter.intensity.corrected.1":48536,"Reporter.intensity.corrected.2":48628,"Reporter.intensity.corrected.3":49477,"Reporter.intensity.corrected.4":65159,"Reporter.intensity.corrected.5":58170,"Reporter.intensity.corrected.6":46033,"Reporter.intensity.corrected.7":70944,"Reporter.intensity.corrected.8":59197,"Reporter.intensity.corrected.9":59767,"Reporter.intensity.corrected.10":39874,"Reporter.intensity.1":48536,"Reporter.intensity.2":48628,"Reporter.intensity.3":49477,"Reporter.intensity.4":65159,"Reporter.intensity.5":58170,"Reporter.intensity.6":46033,"Reporter.intensity.7":70944,"Reporter.intensity.8":59197,"Reporter.intensity.9":59767,"Reporter.intensity.10":39874,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":3150,"Protein.group.IDs":"698","Peptide.ID":1018,"Mod..peptide.ID":1160,"MS.MS.IDs":"3653","Best.MS.MS":3653,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1206;1207;1208;1209;1210;6153;6154"}
{"Sequence":"EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK","Length":32,"Modifications":"Phospho (STY)","Modified.sequence":"_EAPAEGEAAEPGSPTAAEGEAASAASSTSS(Phospho (STY))PK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EAPAEGEAAEPGSPTAAEGEAASAASS(0.005)T(0.012)S(0.166)S(0.816)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EAPAEGEAAEPGS(-49)PT(-42)AAEGEAAS(-41)AAS(-33)S(-22)T(-18)S(-6.9)S(6.9)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_3","Fraction":3,"Experiment":"MS2","MS.MS.m.z":1152.20544,"Charge":3,"m.z":999.09445,"Mass":2994.26153,"Uncalibrated...Calibrated.m.z..ppm.":1.8128,"Uncalibrated...Calibrated.m.z..Da.":0.00181,"Mass.error..ppm.":152910,"Mass.error..Da.":152.77,"Uncalibrated.mass.error..ppm.":152910,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":1152.20324,"Retention.time":75.423,"Retention.length":0.5957,"Calibrated.retention.time":75.423,"Calibrated.retention.time.start":75.124,"Calibrated.retention.time.finish":75.72,"Retention.time.calibration":0,"Number.of.data.points":82,"Number.of.scans":22,"Number.of.isotopic.peaks":6,"PIF":0.88965,"Fraction.of.total.spectrum":0.0013,"Base.peak.fraction":0.01629,"PEP":1.0121e-09,"MS.MS.count":2,"MS.MS.scan.number":23260,"Score":89.681,"Delta.score":75.098,"Combinatorics":8,"Intensity":17747000,"Reporter.intensity.corrected.1":16190,"Reporter.intensity.corrected.2":17358,"Reporter.intensity.corrected.3":18555,"Reporter.intensity.corrected.4":16924,"Reporter.intensity.corrected.5":18756,"Reporter.intensity.corrected.6":22906,"Reporter.intensity.corrected.7":18918,"Reporter.intensity.corrected.8":19781,"Reporter.intensity.corrected.9":16681,"Reporter.intensity.corrected.10":17169,"Reporter.intensity.1":16190,"Reporter.intensity.2":17358,"Reporter.intensity.3":18555,"Reporter.intensity.4":16924,"Reporter.intensity.5":18756,"Reporter.intensity.6":22906,"Reporter.intensity.7":18918,"Reporter.intensity.8":19781,"Reporter.intensity.9":16681,"Reporter.intensity.10":17169,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":3151,"Protein.group.IDs":"698","Peptide.ID":1018,"Mod..peptide.ID":1160,"MS.MS.IDs":"3654;3655","Best.MS.MS":3655,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1206;1207;1208;1209;1210;6153;6154"}
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{"Sequence":"EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK","Length":32,"Modifications":"2 Phospho (STY)","Modified.sequence":"_EAPAEGEAAEPGS(Phospho (STY))PT(Phospho (STY))AAEGEAASAASSTSSPK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EAPAEGEAAEPGS(0.248)PT(0.248)AAEGEAAS(0.248)AAS(0.258)S(0.259)T(0.254)S(0.254)S(0.232)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EAPAEGEAAEPGS(0)PT(0)AAEGEAAS(0)AAS(-0.5)S(-0.5)T(0)S(0)S(-0.5)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":2,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":884.3988,"Charge":4,"m.z":769.56424,"Mass":3074.22786,"Uncalibrated...Calibrated.m.z..ppm.":2.4866,"Uncalibrated...Calibrated.m.z..Da.":0.00191,"Mass.error..ppm.":148890,"Mass.error..Da.":114.58,"Uncalibrated.mass.error..ppm.":148890,"Uncalibrated.mass.error..Da.":114.58,"Max.intensity.m.z.0":884.3964,"Retention.time":81.39,"Retention.length":1.1305,"Calibrated.retention.time":81.39,"Calibrated.retention.time.start":80.644,"Calibrated.retention.time.finish":81.774,"Retention.time.calibration":0,"Number.of.data.points":178,"Number.of.scans":42,"Number.of.isotopic.peaks":7,"PIF":0.74484,"Fraction.of.total.spectrum":0.00162,"Base.peak.fraction":0.0122,"PEP":0.00521,"MS.MS.count":1,"MS.MS.scan.number":25178,"Score":44.05,"Delta.score":30.034,"Combinatorics":28,"Intensity":68670000,"Reporter.intensity.corrected.1":0,"Reporter.intensity.corrected.2":0,"Reporter.intensity.corrected.3":0,"Reporter.intensity.corrected.4":0,"Reporter.intensity.corrected.5":0,"Reporter.intensity.corrected.6":0,"Reporter.intensity.corrected.7":0,"Reporter.intensity.corrected.8":0,"Reporter.intensity.corrected.9":0,"Reporter.intensity.corrected.10":0,"Reporter.intensity.1":0,"Reporter.intensity.2":0,"Reporter.intensity.3":0,"Reporter.intensity.4":0,"Reporter.intensity.5":0,"Reporter.intensity.6":0,"Reporter.intensity.7":0,"Reporter.intensity.8":0,"Reporter.intensity.9":0,"Reporter.intensity.10":0,"Reporter.intensity.count.1":0,"Reporter.intensity.count.2":0,"Reporter.intensity.count.3":0,"Reporter.intensity.count.4":0,"Reporter.intensity.count.5":0,"Reporter.intensity.count.6":0,"Reporter.intensity.count.7":0,"Reporter.intensity.count.8":0,"Reporter.intensity.count.9":0,"Reporter.intensity.count.10":0,"Reverse":"","Potential.contaminant":"","id":3154,"Protein.group.IDs":"698","Peptide.ID":1018,"Mod..peptide.ID":1161,"MS.MS.IDs":"3658","Best.MS.MS":3658,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1206;1207;1208;1209;1210;6153;6154"}
{"Sequence":"EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK","Length":32,"Modifications":"2 Phospho (STY)","Modified.sequence":"_EAPAEGEAAEPGS(Phospho (STY))PTAAEGEAASAASSTSS(Phospho (STY))PK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EAPAEGEAAEPGS(0.623)PT(0.327)AAEGEAAS(0.06)AAS(0.048)S(0.048)T(0.046)S(0.15)S(0.697)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EAPAEGEAAEPGS(3.3)PT(-3.3)AAEGEAAS(-14)AAS(-15)S(-15)T(-15)S(-7.1)S(7.1)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":2,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_2","Fraction":2,"Experiment":"MS2","MS.MS.m.z":884.39777,"Charge":4,"m.z":769.56424,"Mass":3074.22786,"Uncalibrated...Calibrated.m.z..ppm.":2.3763,"Uncalibrated...Calibrated.m.z..Da.":0.00183,"Mass.error..ppm.":148890,"Mass.error..Da.":114.58,"Uncalibrated.mass.error..ppm.":148890,"Uncalibrated.mass.error..Da.":114.58,"Max.intensity.m.z.0":884.39636,"Retention.time":81.009,"Retention.length":0.95567,"Calibrated.retention.time":81.009,"Calibrated.retention.time.start":80.374,"Calibrated.retention.time.finish":81.329,"Retention.time.calibration":0,"Number.of.data.points":164,"Number.of.scans":36,"Number.of.isotopic.peaks":6,"PIF":0.91609,"Fraction.of.total.spectrum":0.00688,"Base.peak.fraction":0.06248,"PEP":5.6634e-06,"MS.MS.count":1,"MS.MS.scan.number":25339,"Score":64.614,"Delta.score":51.293,"Combinatorics":28,"Intensity":77518000,"Reporter.intensity.corrected.1":61578,"Reporter.intensity.corrected.2":60440,"Reporter.intensity.corrected.3":54836,"Reporter.intensity.corrected.4":68114,"Reporter.intensity.corrected.5":61102,"Reporter.intensity.corrected.6":67214,"Reporter.intensity.corrected.7":63786,"Reporter.intensity.corrected.8":67310,"Reporter.intensity.corrected.9":64873,"Reporter.intensity.corrected.10":56922,"Reporter.intensity.1":61578,"Reporter.intensity.2":60440,"Reporter.intensity.3":54836,"Reporter.intensity.4":68114,"Reporter.intensity.5":61102,"Reporter.intensity.6":67214,"Reporter.intensity.7":63786,"Reporter.intensity.8":67310,"Reporter.intensity.9":64873,"Reporter.intensity.10":56922,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":3155,"Protein.group.IDs":"698","Peptide.ID":1018,"Mod..peptide.ID":1161,"MS.MS.IDs":"3659","Best.MS.MS":3659,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1206;1207;1208;1209;1210;6153;6154"}
{"Sequence":"EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK","Length":32,"Modifications":"2 Phospho (STY)","Modified.sequence":"_EAPAEGEAAEPGS(Phospho (STY))PTAAEGEAASAASSTS(Phospho (STY))SPK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EAPAEGEAAEPGS(0.733)PT(0.261)AAEGEAAS(0.006)AAS(0.002)S(0.019)T(0.051)S(0.537)S(0.39)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EAPAEGEAAEPGS(4.5)PT(-4.5)AAEGEAAS(-21)AAS(-24)S(-15)T(-10)S(1.4)S(-1.4)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":2,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_2","Fraction":2,"Experiment":"MS2","MS.MS.m.z":1179.19666,"Charge":3,"m.z":1025.7499,"Mass":3074.22786,"Uncalibrated...Calibrated.m.z..ppm.":2.1806,"Uncalibrated...Calibrated.m.z..Da.":0.00224,"Mass.error..ppm.":148940,"Mass.error..Da.":152.78,"Uncalibrated.mass.error..ppm.":148940,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":1179.19386,"Retention.time":80.957,"Retention.length":0.56792,"Calibrated.retention.time":80.957,"Calibrated.retention.time.start":80.652,"Calibrated.retention.time.finish":81.22,"Retention.time.calibration":0,"Number.of.data.points":61,"Number.of.scans":21,"Number.of.isotopic.peaks":5,"PIF":0.95765,"Fraction.of.total.spectrum":0.00199,"Base.peak.fraction":0.01918,"PEP":3.7452e-07,"MS.MS.count":1,"MS.MS.scan.number":25417,"Score":75.78,"Delta.score":66.868,"Combinatorics":28,"Intensity":9088100,"Reporter.intensity.corrected.1":14326,"Reporter.intensity.corrected.2":11986,"Reporter.intensity.corrected.3":9573.2,"Reporter.intensity.corrected.4":18509,"Reporter.intensity.corrected.5":15352,"Reporter.intensity.corrected.6":17756,"Reporter.intensity.corrected.7":20593,"Reporter.intensity.corrected.8":20411,"Reporter.intensity.corrected.9":18564,"Reporter.intensity.corrected.10":13702,"Reporter.intensity.1":14326,"Reporter.intensity.2":11986,"Reporter.intensity.3":9573.2,"Reporter.intensity.4":18509,"Reporter.intensity.5":15352,"Reporter.intensity.6":17756,"Reporter.intensity.7":20593,"Reporter.intensity.8":20411,"Reporter.intensity.9":18564,"Reporter.intensity.10":13702,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":3156,"Protein.group.IDs":"698","Peptide.ID":1018,"Mod..peptide.ID":1161,"MS.MS.IDs":"3660","Best.MS.MS":3660,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1206;1207;1208;1209;1210;6153;6154"}
{"Sequence":"EAPAEGEAAEPGSPTAAEGEAASAASSTSSPK","Length":32,"Modifications":"2 Phospho (STY)","Modified.sequence":"_EAPAEGEAAEPGS(Phospho (STY))PTAAEGEAASAASSTSS(Phospho (STY))PK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EAPAEGEAAEPGS(0.295)PT(0.234)AAEGEAAS(0.214)AAS(0.227)S(0.23)T(0.227)S(0.236)S(0.337)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EAPAEGEAAEPGS(2.7)PT(-2.7)AAEGEAAS(-5.1)AAS(-4.6)S(-4.6)T(-4.1)S(-4.1)S(4.1)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":2,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_3","Fraction":3,"Experiment":"MS2","MS.MS.m.z":884.39844,"Charge":4,"m.z":769.56424,"Mass":3074.22786,"Uncalibrated...Calibrated.m.z..ppm.":1.6993,"Uncalibrated...Calibrated.m.z..Da.":0.00131,"Mass.error..ppm.":148890,"Mass.error..Da.":114.58,"Uncalibrated.mass.error..ppm.":148890,"Uncalibrated.mass.error..Da.":114.58,"Max.intensity.m.z.0":884.39645,"Retention.time":81.458,"Retention.length":1.1366,"Calibrated.retention.time":81.458,"Calibrated.retention.time.start":80.808,"Calibrated.retention.time.finish":81.944,"Retention.time.calibration":0,"Number.of.data.points":174,"Number.of.scans":44,"Number.of.isotopic.peaks":6,"PIF":0.85582,"Fraction.of.total.spectrum":0.00908,"Base.peak.fraction":0.09445,"PEP":0.00207,"MS.MS.count":2,"MS.MS.scan.number":25458,"Score":47.941,"Delta.score":34.621,"Combinatorics":28,"Intensity":82233000,"Reporter.intensity.corrected.1":104260,"Reporter.intensity.corrected.2":108680,"Reporter.intensity.corrected.3":85789,"Reporter.intensity.corrected.4":107040,"Reporter.intensity.corrected.5":95691,"Reporter.intensity.corrected.6":97834,"Reporter.intensity.corrected.7":109110,"Reporter.intensity.corrected.8":111140,"Reporter.intensity.corrected.9":104290,"Reporter.intensity.corrected.10":96679,"Reporter.intensity.1":104260,"Reporter.intensity.2":108680,"Reporter.intensity.3":85789,"Reporter.intensity.4":107040,"Reporter.intensity.5":95691,"Reporter.intensity.6":97834,"Reporter.intensity.7":109110,"Reporter.intensity.8":111140,"Reporter.intensity.9":104290,"Reporter.intensity.10":96679,"Reporter.intensity.count.1":2,"Reporter.intensity.count.2":2,"Reporter.intensity.count.3":2,"Reporter.intensity.count.4":2,"Reporter.intensity.count.5":2,"Reporter.intensity.count.6":2,"Reporter.intensity.count.7":2,"Reporter.intensity.count.8":2,"Reporter.intensity.count.9":2,"Reporter.intensity.count.10":2,"Reverse":"","Potential.contaminant":"","id":3157,"Protein.group.IDs":"698","Peptide.ID":1018,"Mod..peptide.ID":1161,"MS.MS.IDs":"3661;3662","Best.MS.MS":3662,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1206;1207;1208;1209;1210;6153;6154"}
{"Sequence":"EELQANGSAPAADK","Length":14,"Modifications":"Phospho (STY)","Modified.sequence":"_EELQANGS(Phospho (STY))APAADK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EELQANGS(1)APAADK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EELQANGS(53)APAADK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":646.99255,"Charge":3,"m.z":494.21537,"Mass":1479.62427,"Uncalibrated...Calibrated.m.z..ppm.":2.7151,"Uncalibrated...Calibrated.m.z..Da.":0.00134,"Mass.error..ppm.":309130,"Mass.error..Da.":152.78,"Uncalibrated.mass.error..ppm.":309130,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":646.99081,"Retention.time":60.976,"Retention.length":0.21024,"Calibrated.retention.time":60.976,"Calibrated.retention.time.start":60.824,"Calibrated.retention.time.finish":61.034,"Retention.time.calibration":0,"Number.of.data.points":16,"Number.of.scans":8,"Number.of.isotopic.peaks":3,"PIF":0.21239,"Fraction.of.total.spectrum":0.00025,"Base.peak.fraction":0.00152,"PEP":0.00806,"MS.MS.count":1,"MS.MS.scan.number":17577,"Score":53.453,"Delta.score":32.081,"Combinatorics":1,"Intensity":20761000,"Reporter.intensity.corrected.1":0,"Reporter.intensity.corrected.2":0,"Reporter.intensity.corrected.3":0,"Reporter.intensity.corrected.4":0,"Reporter.intensity.corrected.5":0,"Reporter.intensity.corrected.6":0,"Reporter.intensity.corrected.7":0,"Reporter.intensity.corrected.8":0,"Reporter.intensity.corrected.9":0,"Reporter.intensity.corrected.10":0,"Reporter.intensity.1":0,"Reporter.intensity.2":0,"Reporter.intensity.3":0,"Reporter.intensity.4":0,"Reporter.intensity.5":0,"Reporter.intensity.6":0,"Reporter.intensity.7":0,"Reporter.intensity.8":0,"Reporter.intensity.9":0,"Reporter.intensity.10":0,"Reporter.intensity.count.1":0,"Reporter.intensity.count.2":0,"Reporter.intensity.count.3":0,"Reporter.intensity.count.4":0,"Reporter.intensity.count.5":0,"Reporter.intensity.count.6":0,"Reporter.intensity.count.7":0,"Reporter.intensity.count.8":0,"Reporter.intensity.count.9":0,"Reporter.intensity.count.10":0,"Reverse":"","Potential.contaminant":"","id":3555,"Protein.group.IDs":"698","Peptide.ID":1133,"Mod..peptide.ID":1294,"MS.MS.IDs":"4201","Best.MS.MS":4201,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1211"}
{"Sequence":"EELQANGSAPAADKEEPAAAGSGAASPSAAEK","Length":32,"Modifications":"Phospho (STY)","Modified.sequence":"_EELQANGSAPAADKEEPAAAGSGAAS(Phospho (STY))PSAAEK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EELQANGSAPAADKEEPAAAGS(0.271)GAAS(0.702)PS(0.027)AAEK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EELQANGS(-75)APAADKEEPAAAGS(-4.1)GAAS(4.1)PS(-14)AAEK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":1,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":938.22015,"Charge":4,"m.z":766.34511,"Mass":3061.35135,"Uncalibrated...Calibrated.m.z..ppm.":2.4819,"Uncalibrated...Calibrated.m.z..Da.":0.0019,"Mass.error..ppm.":224280,"Mass.error..Da.":171.87,"Uncalibrated.mass.error..ppm.":224280,"Uncalibrated.mass.error..Da.":171.87,"Max.intensity.m.z.0":938.46826,"Retention.time":71.436,"Retention.length":0.35105,"Calibrated.retention.time":71.436,"Calibrated.retention.time.start":71.23,"Calibrated.retention.time.finish":71.581,"Retention.time.calibration":0,"Number.of.data.points":58,"Number.of.scans":14,"Number.of.isotopic.peaks":6,"PIF":0.39882,"Fraction.of.total.spectrum":0.00096,"Base.peak.fraction":0.01742,"PEP":2.1343e-14,"MS.MS.count":1,"MS.MS.scan.number":21531,"Score":105.37,"Delta.score":85.996,"Combinatorics":4,"Intensity":16790000,"Reporter.intensity.corrected.1":0,"Reporter.intensity.corrected.2":0,"Reporter.intensity.corrected.3":0,"Reporter.intensity.corrected.4":0,"Reporter.intensity.corrected.5":0,"Reporter.intensity.corrected.6":0,"Reporter.intensity.corrected.7":0,"Reporter.intensity.corrected.8":0,"Reporter.intensity.corrected.9":0,"Reporter.intensity.corrected.10":0,"Reporter.intensity.1":0,"Reporter.intensity.2":0,"Reporter.intensity.3":0,"Reporter.intensity.4":0,"Reporter.intensity.5":0,"Reporter.intensity.6":0,"Reporter.intensity.7":0,"Reporter.intensity.8":0,"Reporter.intensity.9":0,"Reporter.intensity.10":0,"Reporter.intensity.count.1":0,"Reporter.intensity.count.2":0,"Reporter.intensity.count.3":0,"Reporter.intensity.count.4":0,"Reporter.intensity.count.5":0,"Reporter.intensity.count.6":0,"Reporter.intensity.count.7":0,"Reporter.intensity.count.8":0,"Reporter.intensity.count.9":0,"Reporter.intensity.count.10":0,"Reverse":"","Potential.contaminant":"","id":3556,"Protein.group.IDs":"698","Peptide.ID":1134,"Mod..peptide.ID":1295,"MS.MS.IDs":"4202","Best.MS.MS":4202,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1211;1212;1213"}
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{"Sequence":"EEPAAAGSGAASPSAAEK","Length":18,"Modifications":"2 Phospho (STY)","Modified.sequence":"_EEPAAAGS(Phospho (STY))GAAS(Phospho (STY))PSAAEK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"EEPAAAGS(0.999)GAAS(0.969)PS(0.032)AAEK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"EEPAAAGS(29)GAAS(15)PS(-15)AAEK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":2,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_3","Fraction":3,"Experiment":"MS2","MS.MS.m.z":740.33972,"Charge":3,"m.z":587.56404,"Mass":1759.6703,"Uncalibrated...Calibrated.m.z..ppm.":1.7405,"Uncalibrated...Calibrated.m.z..Da.":0.00102,"Mass.error..ppm.":260010,"Mass.error..Da.":152.78,"Uncalibrated.mass.error..ppm.":260020,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":740.33926,"Retention.time":58.712,"Retention.length":0.52788,"Calibrated.retention.time":58.712,"Calibrated.retention.time.start":58.391,"Calibrated.retention.time.finish":58.919,"Retention.time.calibration":0,"Number.of.data.points":45,"Number.of.scans":21,"Number.of.isotopic.peaks":3,"PIF":0.96217,"Fraction.of.total.spectrum":0.00073,"Base.peak.fraction":0.01111,"PEP":0.00004,"MS.MS.count":2,"MS.MS.scan.number":16852,"Score":86.357,"Delta.score":66.519,"Combinatorics":3,"Intensity":9219200,"Reporter.intensity.corrected.1":94525,"Reporter.intensity.corrected.2":99158,"Reporter.intensity.corrected.3":96888,"Reporter.intensity.corrected.4":93634,"Reporter.intensity.corrected.5":93228,"Reporter.intensity.corrected.6":96608,"Reporter.intensity.corrected.7":106720,"Reporter.intensity.corrected.8":119610,"Reporter.intensity.corrected.9":105830,"Reporter.intensity.corrected.10":97405,"Reporter.intensity.1":94525,"Reporter.intensity.2":99158,"Reporter.intensity.3":96888,"Reporter.intensity.4":93634,"Reporter.intensity.5":93228,"Reporter.intensity.6":96608,"Reporter.intensity.7":106720,"Reporter.intensity.8":119610,"Reporter.intensity.9":105830,"Reporter.intensity.10":97405,"Reporter.intensity.count.1":2,"Reporter.intensity.count.2":2,"Reporter.intensity.count.3":2,"Reporter.intensity.count.4":2,"Reporter.intensity.count.5":2,"Reporter.intensity.count.6":2,"Reporter.intensity.count.7":2,"Reporter.intensity.count.8":2,"Reporter.intensity.count.9":2,"Reporter.intensity.count.10":2,"Reverse":"","Potential.contaminant":"","id":3596,"Protein.group.IDs":"698","Peptide.ID":1143,"Mod..peptide.ID":1308,"MS.MS.IDs":"4255;4256","Best.MS.MS":4255,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1212;1213"}
{"Sequence":"ETINNLDTSSSDFTILQEIEEPSLEPENEK","Length":30,"Modifications":"Phospho (STY)","Modified.sequence":"_ETINNLDTSSSDFTILQEIEEPS(Phospho (STY))LEPENEK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"ETINNLDT(0.037)S(0.177)S(0.177)S(0.177)DFT(0.177)ILQEIEEPS(0.256)LEPENEK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"ET(-43)INNLDT(-8.4)S(-1.6)S(-1.6)S(-1.6)DFT(-1.6)ILQEIEEPS(1.6)LEPENEK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"Q15424","Leading.proteins":"Q15424","Leading.razor.protein":"Q15424","Gene.names":"SAFB","Protein.names":"Scaffold attachment factor B1","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_2","Fraction":2,"Experiment":"MS2","MS.MS.m.z":1321.30994,"Charge":3,"m.z":1167.86085,"Mass":3500.56073,"Uncalibrated...Calibrated.m.z..ppm.":2.1407,"Uncalibrated...Calibrated.m.z..Da.":0.0025,"Mass.error..ppm.":130820,"Mass.error..Da.":152.78,"Uncalibrated.mass.error..ppm.":130820,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":1321.30678,"Retention.time":129.51,"Retention.length":0.16064,"Calibrated.retention.time":129.51,"Calibrated.retention.time.start":129.44,"Calibrated.retention.time.finish":129.6,"Retention.time.calibration":0,"Number.of.data.points":12,"Number.of.scans":5,"Number.of.isotopic.peaks":4,"PIF":0.67027,"Fraction.of.total.spectrum":0.00194,"Base.peak.fraction":0.03738,"PEP":0.00003,"MS.MS.count":1,"MS.MS.scan.number":43815,"Score":63.491,"Delta.score":45.697,"Combinatorics":7,"Intensity":115980000,"Reporter.intensity.corrected.1":0,"Reporter.intensity.corrected.2":0,"Reporter.intensity.corrected.3":0,"Reporter.intensity.corrected.4":0,"Reporter.intensity.corrected.5":0,"Reporter.intensity.corrected.6":0,"Reporter.intensity.corrected.7":0,"Reporter.intensity.corrected.8":0,"Reporter.intensity.corrected.9":0,"Reporter.intensity.corrected.10":0,"Reporter.intensity.1":0,"Reporter.intensity.2":0,"Reporter.intensity.3":0,"Reporter.intensity.4":0,"Reporter.intensity.5":0,"Reporter.intensity.6":0,"Reporter.intensity.7":0,"Reporter.intensity.8":0,"Reporter.intensity.9":0,"Reporter.intensity.10":0,"Reporter.intensity.count.1":0,"Reporter.intensity.count.2":0,"Reporter.intensity.count.3":0,"Reporter.intensity.count.4":0,"Reporter.intensity.count.5":0,"Reporter.intensity.count.6":0,"Reporter.intensity.count.7":0,"Reporter.intensity.count.8":0,"Reporter.intensity.count.9":0,"Reporter.intensity.count.10":0,"Reverse":"","Potential.contaminant":"","id":4950,"Protein.group.IDs":"1793","Peptide.ID":1568,"Mod..peptide.ID":1786,"MS.MS.IDs":"5931","Best.MS.MS":5931,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"3294;3295;3296;3297;6630"}
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{"Sequence":"LSGFSFK","Length":7,"Modifications":"Phospho (STY)","Modified.sequence":"_LSGFS(Phospho (STY))FK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"LS(0.001)GFS(0.999)FK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"LS(-32)GFS(32)FK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":662.86255,"Charge":2,"m.z":433.19641,"Mass":864.37827,"Uncalibrated...Calibrated.m.z..ppm.":3.2883,"Uncalibrated...Calibrated.m.z..Da.":0.00142,"Mass.error..ppm.":529000,"Mass.error..Da.":229.16,"Uncalibrated.mass.error..ppm.":529010,"Uncalibrated.mass.error..Da.":229.16,"Max.intensity.m.z.0":662.35903,"Retention.time":115.76,"Retention.length":1.1172,"Calibrated.retention.time":115.76,"Calibrated.retention.time.start":115.31,"Calibrated.retention.time.finish":116.42,"Retention.time.calibration":0,"Number.of.data.points":129,"Number.of.scans":51,"Number.of.isotopic.peaks":4,"PIF":0.92846,"Fraction.of.total.spectrum":0.00187,"Base.peak.fraction":0.07724,"PEP":0.04705,"MS.MS.count":1,"MS.MS.scan.number":38362,"Score":76.605,"Delta.score":32.227,"Combinatorics":2,"Intensity":19524000,"Reporter.intensity.corrected.1":67151,"Reporter.intensity.corrected.2":859070,"Reporter.intensity.corrected.3":0,"Reporter.intensity.corrected.4":399010,"Reporter.intensity.corrected.5":83273,"Reporter.intensity.corrected.6":148430,"Reporter.intensity.corrected.7":114340,"Reporter.intensity.corrected.8":97531,"Reporter.intensity.corrected.9":130010,"Reporter.intensity.corrected.10":226790,"Reporter.intensity.1":67151,"Reporter.intensity.2":859070,"Reporter.intensity.3":0,"Reporter.intensity.4":399010,"Reporter.intensity.5":83273,"Reporter.intensity.6":148430,"Reporter.intensity.7":114340,"Reporter.intensity.8":97531,"Reporter.intensity.9":130010,"Reporter.intensity.10":226790,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":0,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":9116,"Protein.group.IDs":"698","Peptide.ID":3006,"Mod..peptide.ID":3391,"MS.MS.IDs":"10662","Best.MS.MS":10662,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1217;1218"}
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{"Sequence":"MSSPEDDSDTK","Length":11,"Modifications":"Oxidation (M),Phospho (STY)","Modified.sequence":"_M(Oxidation (M))S(Phospho (STY))SPEDDSDTK_","Oxidation..M..Probabilities":"M(1)SSPEDDSDTK","Phospho..STY..Probabilities":"MS(0.5)S(0.5)PEDDSDTK","Oxidation..M..Score.Diffs":"M(50)SSPEDDSDTK","Phospho..STY..Score.Diffs":"MS(0)S(0)PEDDS(-34)DT(-43)K","Acetyl..N.term.":0,"Oxidation..M.":1,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"Q15424","Leading.proteins":"Q15424","Leading.razor.protein":"Q15424","Gene.names":"SAFB","Protein.names":"Scaffold attachment factor B1","Type":"MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_3","Fraction":3,"Experiment":"MS2","MS.MS.m.z":883.38385,"Charge":2,"m.z":654.22088,"Mass":1306.42721,"Retention.time":40.119,"Retention.length":1,"Calibrated.retention.time":40.119,"Calibrated.retention.time.start":39.619,"Calibrated.retention.time.finish":40.619,"Retention.time.calibration":0,"PEP":0.02673,"MS.MS.count":1,"MS.MS.scan.number":9873,"Score":50.123,"Delta.score":31.963,"Combinatorics":4,"Reporter.intensity.corrected.1":0,"Reporter.intensity.corrected.2":0,"Reporter.intensity.corrected.3":0,"Reporter.intensity.corrected.4":0,"Reporter.intensity.corrected.5":0,"Reporter.intensity.corrected.6":0,"Reporter.intensity.corrected.7":0,"Reporter.intensity.corrected.8":0,"Reporter.intensity.corrected.9":0,"Reporter.intensity.corrected.10":0,"Reporter.intensity.1":0,"Reporter.intensity.2":0,"Reporter.intensity.3":0,"Reporter.intensity.4":0,"Reporter.intensity.5":0,"Reporter.intensity.6":0,"Reporter.intensity.7":0,"Reporter.intensity.8":0,"Reporter.intensity.9":0,"Reporter.intensity.10":0,"Reporter.intensity.count.1":0,"Reporter.intensity.count.2":0,"Reporter.intensity.count.3":0,"Reporter.intensity.count.4":0,"Reporter.intensity.count.5":0,"Reporter.intensity.count.6":0,"Reporter.intensity.count.7":0,"Reporter.intensity.count.8":0,"Reporter.intensity.count.9":0,"Reporter.intensity.count.10":0,"Reverse":"","Potential.contaminant":"","id":9793,"Protein.group.IDs":"1793","Peptide.ID":3203,"Mod..peptide.ID":3644,"MS.MS.IDs":"11463","Best.MS.MS":11463,"Oxidation..M..site.IDs":"292","Phospho..STY..site.IDs":"3298;3299"}
{"Sequence":"PAGATPK","Length":7,"Modifications":"Phospho (STY)","Modified.sequence":"_PAGAT(Phospho (STY))PK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"PAGAT(1)PK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"PAGAT(70)PK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P16401","Leading.proteins":"P16401","Leading.razor.protein":"P16401","Gene.names":"HIST1H1B","Protein.names":"Histone H1.5","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_3","Fraction":3,"Experiment":"MS2","MS.MS.m.z":590.33014,"Charge":2,"m.z":361.16765,"Mass":720.32076,"Uncalibrated...Calibrated.m.z..ppm.":1.6036,"Uncalibrated...Calibrated.m.z..Da.":0.00058,"Mass.error..ppm.":634510,"Mass.error..Da.":229.16,"Uncalibrated.mass.error..ppm.":634510,"Uncalibrated.mass.error..Da.":229.16,"Max.intensity.m.z.0":590.33068,"Retention.time":43.42,"Retention.length":0.61607,"Calibrated.retention.time":43.42,"Calibrated.retention.time.start":43.053,"Calibrated.retention.time.finish":43.67,"Retention.time.calibration":0,"Number.of.data.points":59,"Number.of.scans":24,"Number.of.isotopic.peaks":3,"PIF":0.69613,"Fraction.of.total.spectrum":0.00117,"Base.peak.fraction":0.02213,"PEP":0.04369,"MS.MS.count":1,"MS.MS.scan.number":11067,"Score":69.812,"Delta.score":36.919,"Combinatorics":1,"Intensity":5709400,"Reporter.intensity.corrected.1":0,"Reporter.intensity.corrected.2":0,"Reporter.intensity.corrected.3":0,"Reporter.intensity.corrected.4":0,"Reporter.intensity.corrected.5":0,"Reporter.intensity.corrected.6":0,"Reporter.intensity.corrected.7":0,"Reporter.intensity.corrected.8":0,"Reporter.intensity.corrected.9":0,"Reporter.intensity.corrected.10":0,"Reporter.intensity.1":0,"Reporter.intensity.2":0,"Reporter.intensity.3":0,"Reporter.intensity.4":0,"Reporter.intensity.5":0,"Reporter.intensity.6":0,"Reporter.intensity.7":0,"Reporter.intensity.8":0,"Reporter.intensity.9":0,"Reporter.intensity.10":0,"Reporter.intensity.count.1":0,"Reporter.intensity.count.2":0,"Reporter.intensity.count.3":0,"Reporter.intensity.count.4":0,"Reporter.intensity.count.5":0,"Reporter.intensity.count.6":0,"Reporter.intensity.count.7":0,"Reporter.intensity.count.8":0,"Reporter.intensity.count.9":0,"Reporter.intensity.count.10":0,"Reverse":"","Potential.contaminant":"","id":10506,"Protein.group.IDs":"518","Peptide.ID":3469,"Mod..peptide.ID":3934,"MS.MS.IDs":"12271","Best.MS.MS":12271,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"6059"}
{"Sequence":"PSVPSADSETPLTQDRPGSPSGSEDK","Length":26,"Modifications":"Phospho (STY)","Modified.sequence":"_PSVPSADSETPLTQDRPGS(Phospho (STY))PSGSEDK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"PSVPSADSETPLT(0.002)QDRPGS(0.993)PS(0.005)GSEDK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"PS(-110)VPS(-79)ADS(-65)ET(-51)PLT(-28)QDRPGS(23)PS(-23)GS(-36)EDK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":1,"Proteins":"Q96FS4","Leading.proteins":"Q96FS4","Leading.razor.protein":"Q96FS4","Gene.names":"SIPA1","Protein.names":"Signal-induced proliferation-associated protein 1","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":1060.84595,"Charge":3,"m.z":907.73442,"Mass":2720.18143,"Uncalibrated...Calibrated.m.z..ppm.":2.5711,"Uncalibrated...Calibrated.m.z..Da.":0.00233,"Mass.error..ppm.":168300,"Mass.error..Da.":152.78,"Uncalibrated.mass.error..ppm.":168310,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":1060.50951,"Retention.time":77.92,"Retention.length":0.46743,"Calibrated.retention.time":77.92,"Calibrated.retention.time.start":77.651,"Calibrated.retention.time.finish":78.119,"Retention.time.calibration":0,"Number.of.data.points":47,"Number.of.scans":17,"Number.of.isotopic.peaks":4,"PIF":0.95663,"Fraction.of.total.spectrum":0.00149,"Base.peak.fraction":0.01147,"PEP":3.0536e-42,"MS.MS.count":2,"MS.MS.scan.number":23946,"Score":165.37,"Delta.score":140.15,"Combinatorics":8,"Intensity":10153000,"Reporter.intensity.corrected.1":77883,"Reporter.intensity.corrected.2":85064,"Reporter.intensity.corrected.3":53629,"Reporter.intensity.corrected.4":95981,"Reporter.intensity.corrected.5":70375,"Reporter.intensity.corrected.6":60670,"Reporter.intensity.corrected.7":126610,"Reporter.intensity.corrected.8":92869,"Reporter.intensity.corrected.9":71500,"Reporter.intensity.corrected.10":79662,"Reporter.intensity.1":77883,"Reporter.intensity.2":85064,"Reporter.intensity.3":53629,"Reporter.intensity.4":95981,"Reporter.intensity.5":70375,"Reporter.intensity.6":60670,"Reporter.intensity.7":126610,"Reporter.intensity.8":92869,"Reporter.intensity.9":71500,"Reporter.intensity.10":79662,"Reporter.intensity.count.1":2,"Reporter.intensity.count.2":2,"Reporter.intensity.count.3":2,"Reporter.intensity.count.4":2,"Reporter.intensity.count.5":2,"Reporter.intensity.count.6":2,"Reporter.intensity.count.7":2,"Reporter.intensity.count.8":2,"Reporter.intensity.count.9":2,"Reporter.intensity.count.10":2,"Reverse":"","Potential.contaminant":"","id":10707,"Protein.group.IDs":"2413","Peptide.ID":3547,"Mod..peptide.ID":4019,"MS.MS.IDs":"12490;12491","Best.MS.MS":12491,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"4560"}
{"Sequence":"PSVPSADSETPLTQDRPGSPSGSEDK","Length":26,"Modifications":"Phospho (STY)","Modified.sequence":"_PSVPSADSETPLTQDRPGS(Phospho (STY))PSGSEDK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"PSVPS(0.001)ADS(0.002)ET(0.002)PLT(0.021)QDRPGS(0.938)PS(0.032)GS(0.005)EDK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"PS(-41)VPS(-31)ADS(-26)ET(-27)PLT(-17)QDRPGS(15)PS(-15)GS(-23)EDK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":1,"Proteins":"Q96FS4","Leading.proteins":"Q96FS4","Leading.razor.protein":"Q96FS4","Gene.names":"SIPA1","Protein.names":"Signal-induced proliferation-associated protein 1","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_2","Fraction":2,"Experiment":"MS2","MS.MS.m.z":1060.51135,"Charge":3,"m.z":907.73442,"Mass":2720.18143,"Uncalibrated...Calibrated.m.z..ppm.":2.3299,"Uncalibrated...Calibrated.m.z..Da.":0.00211,"Mass.error..ppm.":168300,"Mass.error..Da.":152.78,"Uncalibrated.mass.error..ppm.":168310,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":1061.17858,"Retention.time":77.17,"Retention.length":0.46889,"Calibrated.retention.time":77.17,"Calibrated.retention.time.start":76.941,"Calibrated.retention.time.finish":77.41,"Retention.time.calibration":0,"Number.of.data.points":51,"Number.of.scans":17,"Number.of.isotopic.peaks":4,"PIF":0.8795,"Fraction.of.total.spectrum":0.00026,"Base.peak.fraction":0.00301,"PEP":0.00035,"MS.MS.count":1,"MS.MS.scan.number":23936,"Score":62.295,"Delta.score":52.498,"Combinatorics":8,"Intensity":8984200,"Reporter.intensity.corrected.1":26339,"Reporter.intensity.corrected.2":36965,"Reporter.intensity.corrected.3":24303,"Reporter.intensity.corrected.4":42209,"Reporter.intensity.corrected.5":35043,"Reporter.intensity.corrected.6":30316,"Reporter.intensity.corrected.7":49707,"Reporter.intensity.corrected.8":37358,"Reporter.intensity.corrected.9":42015,"Reporter.intensity.corrected.10":38717,"Reporter.intensity.1":26339,"Reporter.intensity.2":36965,"Reporter.intensity.3":24303,"Reporter.intensity.4":42209,"Reporter.intensity.5":35043,"Reporter.intensity.6":30316,"Reporter.intensity.7":49707,"Reporter.intensity.8":37358,"Reporter.intensity.9":42015,"Reporter.intensity.10":38717,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":10708,"Protein.group.IDs":"2413","Peptide.ID":3547,"Mod..peptide.ID":4019,"MS.MS.IDs":"12492","Best.MS.MS":12492,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"4560"}
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{"Sequence":"TESNSDPRTNIQQVPK","Length":16,"Modifications":"Phospho (STY)","Modified.sequence":"_TES(Phospho (STY))NSDPRTNIQQVPK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"T(0.008)ES(0.496)NS(0.496)DPRTNIQQVPK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"T(-18)ES(0)NS(0)DPRT(-33)NIQQVPK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":1,"Proteins":"Q12256","Leading.proteins":"Q12256","Leading.razor.protein":"Q12256","Gene.names":"TPO4","Protein.names":"Polyamine transporter 4","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":784.73743,"Charge":3,"m.z":631.96159,"Mass":1892.86293,"Uncalibrated...Calibrated.m.z..ppm.":2.2106,"Uncalibrated...Calibrated.m.z..Da.":0.0014,"Mass.error..ppm.":241750,"Mass.error..Da.":152.78,"Uncalibrated.mass.error..ppm.":241750,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":785.07125,"Retention.time":61.633,"Retention.length":0.34078,"Calibrated.retention.time":61.633,"Calibrated.retention.time.start":61.463,"Calibrated.retention.time.finish":61.804,"Retention.time.calibration":0,"Number.of.data.points":43,"Number.of.scans":13,"Number.of.isotopic.peaks":4,"PIF":0.8954,"Fraction.of.total.spectrum":0.00068,"Base.peak.fraction":0.00429,"PEP":0.00014,"MS.MS.count":1,"MS.MS.scan.number":17788,"Score":85.51,"Delta.score":46.001,"Combinatorics":4,"Intensity":19110000,"Reporter.intensity.corrected.1":32432,"Reporter.intensity.corrected.2":78615,"Reporter.intensity.corrected.3":113300,"Reporter.intensity.corrected.4":34778,"Reporter.intensity.corrected.5":68785,"Reporter.intensity.corrected.6":135200,"Reporter.intensity.corrected.7":38725,"Reporter.intensity.corrected.8":79843,"Reporter.intensity.corrected.9":152870,"Reporter.intensity.corrected.10":72541,"Reporter.intensity.1":32432,"Reporter.intensity.2":78615,"Reporter.intensity.3":113300,"Reporter.intensity.4":34778,"Reporter.intensity.5":68785,"Reporter.intensity.6":135200,"Reporter.intensity.7":38725,"Reporter.intensity.8":79843,"Reporter.intensity.9":152870,"Reporter.intensity.10":72541,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":15414,"Protein.group.IDs":"1593","Peptide.ID":5167,"Mod..peptide.ID":5870,"MS.MS.IDs":"17810","Best.MS.MS":17810,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"2864;2865;6522"}
{"Sequence":"TESNSDPRTNIQQVPK","Length":16,"Modifications":"Phospho (STY)","Modified.sequence":"_T(Phospho (STY))ESNSDPRTNIQQVPK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"T(0.434)ES(0.381)NS(0.07)DPRT(0.115)NIQQVPK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"T(0.56)ES(-0.56)NS(-7.9)DPRT(-5.8)NIQQVPK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":1,"Proteins":"Q12256","Leading.proteins":"Q12256","Leading.razor.protein":"Q12256","Gene.names":"TPO4","Protein.names":"Polyamine transporter 4","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_2","Fraction":2,"Experiment":"MS2","MS.MS.m.z":588.80591,"Charge":4,"m.z":474.22301,"Mass":1892.86293,"Uncalibrated...Calibrated.m.z..ppm.":2.3911,"Uncalibrated...Calibrated.m.z..Da.":0.00113,"Mass.error..ppm.":241620,"Mass.error..Da.":114.58,"Uncalibrated.mass.error..ppm.":241620,"Uncalibrated.mass.error..Da.":114.58,"Max.intensity.m.z.0":588.80463,"Retention.time":61.046,"Retention.length":0.46995,"Calibrated.retention.time":61.046,"Calibrated.retention.time.start":60.848,"Calibrated.retention.time.finish":61.318,"Retention.time.calibration":0,"Number.of.data.points":43,"Number.of.scans":17,"Number.of.isotopic.peaks":4,"PIF":0.96278,"Fraction.of.total.spectrum":0.00054,"Base.peak.fraction":0.00254,"PEP":0.01185,"MS.MS.count":1,"MS.MS.scan.number":17834,"Score":72.644,"Delta.score":67.365,"Combinatorics":4,"Intensity":10057000,"Reporter.intensity.corrected.1":23240,"Reporter.intensity.corrected.2":35702,"Reporter.intensity.corrected.3":55632,"Reporter.intensity.corrected.4":21058,"Reporter.intensity.corrected.5":33729,"Reporter.intensity.corrected.6":64860,"Reporter.intensity.corrected.7":26168,"Reporter.intensity.corrected.8":44944,"Reporter.intensity.corrected.9":67230,"Reporter.intensity.corrected.10":39967,"Reporter.intensity.1":23240,"Reporter.intensity.2":35702,"Reporter.intensity.3":55632,"Reporter.intensity.4":21058,"Reporter.intensity.5":33729,"Reporter.intensity.6":64860,"Reporter.intensity.7":26168,"Reporter.intensity.8":44944,"Reporter.intensity.9":67230,"Reporter.intensity.10":39967,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":15415,"Protein.group.IDs":"1593","Peptide.ID":5167,"Mod..peptide.ID":5870,"MS.MS.IDs":"17811","Best.MS.MS":17811,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"2864;2865;6522"}
{"Sequence":"VNGDASPAAAESGAK","Length":15,"Modifications":"Phospho (STY)","Modified.sequence":"_VNGDAS(Phospho (STY))PAAAESGAK_","Oxidation..M..Probabilities":"","Phospho..STY..Probabilities":"VNGDAS(1)PAAAESGAK","Oxidation..M..Score.Diffs":"","Phospho..STY..Score.Diffs":"VNGDAS(46)PAAAES(-46)GAK","Acetyl..N.term.":0,"Oxidation..M.":0,"Phospho..STY.":1,"Missed.cleavages":0,"Proteins":"P29966","Leading.proteins":"P29966","Leading.razor.protein":"P29966","Gene.names":"MARCKS","Protein.names":"Myristoylated alanine-rich C-kinase substrate","Type":"MULTI-MSMS","Raw.file":"20171106_LUMOS1_nLC13_AH_TechBench2_TMTMS2L_1","Fraction":1,"Experiment":"MS2","MS.MS.m.z":628.31671,"Charge":3,"m.z":475.53996,"Mass":1423.59805,"Uncalibrated...Calibrated.m.z..ppm.":2.5535,"Uncalibrated...Calibrated.m.z..Da.":0.00121,"Mass.error..ppm.":321270,"Mass.error..Da.":152.78,"Uncalibrated.mass.error..ppm.":321270,"Uncalibrated.mass.error..Da.":152.78,"Max.intensity.m.z.0":628.3154,"Retention.time":56.657,"Retention.length":0.74348,"Calibrated.retention.time":56.657,"Calibrated.retention.time.start":56.31,"Calibrated.retention.time.finish":57.054,"Retention.time.calibration":0,"Number.of.data.points":114,"Number.of.scans":28,"Number.of.isotopic.peaks":5,"PIF":0.95773,"Fraction.of.total.spectrum":0.00121,"Base.peak.fraction":0.00379,"PEP":0.00021,"MS.MS.count":1,"MS.MS.scan.number":15820,"Score":82.367,"Delta.score":49.633,"Combinatorics":2,"Intensity":171990000,"Reporter.intensity.corrected.1":56852,"Reporter.intensity.corrected.2":63757,"Reporter.intensity.corrected.3":48497,"Reporter.intensity.corrected.4":59105,"Reporter.intensity.corrected.5":57487,"Reporter.intensity.corrected.6":65644,"Reporter.intensity.corrected.7":50708,"Reporter.intensity.corrected.8":48890,"Reporter.intensity.corrected.9":67027,"Reporter.intensity.corrected.10":58000,"Reporter.intensity.1":56852,"Reporter.intensity.2":63757,"Reporter.intensity.3":48497,"Reporter.intensity.4":59105,"Reporter.intensity.5":57487,"Reporter.intensity.6":65644,"Reporter.intensity.7":50708,"Reporter.intensity.8":48890,"Reporter.intensity.9":67027,"Reporter.intensity.10":58000,"Reporter.intensity.count.1":1,"Reporter.intensity.count.2":1,"Reporter.intensity.count.3":1,"Reporter.intensity.count.4":1,"Reporter.intensity.count.5":1,"Reporter.intensity.count.6":1,"Reporter.intensity.count.7":1,"Reporter.intensity.count.8":1,"Reporter.intensity.count.9":1,"Reporter.intensity.count.10":1,"Reverse":"","Potential.contaminant":"","id":16648,"Protein.group.IDs":"698","Peptide.ID":5604,"Mod..peptide.ID":6369,"MS.MS.IDs":"19210","Best.MS.MS":19210,"Oxidation..M..site.IDs":"","Phospho..STY..site.IDs":"1220"}
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