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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "MSstatsLOBD" in publications use:'
type: software
license: Artistic-2.0
title: 'MSstatsLOBD: Assay characterization: estimation of limit of blanc(LoB) and
  limit of detection(LOD)'
version: 1.13.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.MSstatsLOBD
abstract: The MSstatsLOBD package allows calculation and visualization of limit of
  blac (LOB) and limit of detection (LOD). We define the LOB as the highest apparent
  concentration of a peptide expected when replicates of a blank sample containing
  no peptides are measured. The LOD is defined as the measured concentration value
  for which the probability of falsely claiming the absence of a peptide in the sample
  is 0.05, given a probability 0.05 of falsely claiming its presence. These functionalities
  were previously a part of the MSstats package. The methodology is described in Galitzine
  (2018) <https://doi.org/10.1074/mcp.RA117.000322>.
authors:
- family-names: Kohler
  given-names: Devon
  email: kohler.d@northeastern.edu
- family-names: Staniak
  given-names: Mateusz
  email: mtst@mstaniak.pl
- family-names: Galitzine
  given-names: Cyril
  email: cyrildgg@gmail.com
- family-names: Choi
  given-names: Meena
  email: mnchoi67@gmail.com
- family-names: Vitek
  given-names: Olga
  email: o.vitek@northeastern.edu
preferred-citation:
  type: article
  title: Nonlinear Regression Improves Accuracy of Characterization of Multiplexed
    Mass Spectrometric Assays
  authors:
  - family-names: Galitzine
    given-names: Cyril
    email: cyrildgg@gmail.com
  - family-names: Egertson
    given-names: Jarrett D
  - family-names: Abbatiello
    given-names: Susan
  - family-names: Henderson
    given-names: Clark M
  - family-names: Pino
    given-names: Lindsay K
  - family-names: MacCoss
    given-names: Michael
  - family-names: Hoofnagle
    given-names: Andrew N
  - family-names: Vitek
    given-names: Olga
    email: o.vitek@northeastern.edu
  journal: Molecular & Cellular Proteomics
  volume: '17'
  issue: '5'
  year: '2018'
  start: 913-924
repository: https://bioc.r-universe.dev
repository-code: https://github.com/Vitek-Lab/MSstatsLODQ
commit: 2582c17ad26b99a2ce0f4f287c458824751e7a0e
url: https://github.com/Vitek-Lab/MSstatsLODQ
date-released: '2021-04-12'
contact:
- family-names: Kohler
  given-names: Devon
  email: kohler.d@northeastern.edu