Package: MOSim Title: Multi-Omics Simulation (MOSim) Version: 2.9.0 Authors@R: c(person("Carolina", "Monzó", email = "carolmonzoc@gmail.com", role = c("aut")), person("Carlos", "Martínez", email = "cmarmir@gmail.com", role = "aut"), person("Sonia", "Tarazona", email = "sotacam@gmail.com", role = c("cre", "aut"))) Description: MOSim package simulates multi-omic experiments that mimic regulatory mechanisms within the cell, allowing flexible experimental design including time course and multiple groups. Encoding: UTF-8 Depends: R (>= 4.2.0) License: GPL-3 LazyData: false biocViews: Software, TimeCourse, ExperimentalDesign, RNASeq BugReports: https://github.com/ConesaLab/MOSim/issues URL: https://github.com/ConesaLab/MOSim Imports: HiddenMarkov, zoo, IRanges, S4Vectors, dplyr, ggplot2, lazyeval, matrixStats, methods, rlang, stringi, stringr, scran, Seurat, Signac, edgeR, Rcpp Suggests: testthat, knitr, rmarkdown, codetools, BiocStyle, stats, utils, purrr, scales, tibble, tidyr, Biobase, scater, SingleCellExperiment, decor, markdown, Rsamtools, igraph, leiden, bluster Collate: 'AllClass.R' 'AllGeneric.R' 'Simulator.R' 'SimulatorRegion.R' 'ChIP-seq.R' 'DNase-seq.R' 'MOSim-package.R' 'functions.R' 'Simulation.R' 'MOSim.R' 'RNA-seq.R' 'data.R' 'simulate_WGBS_functions.R' 'methyl-seq.R' 'miRNA-seq.R' 'sc_MOSim.R' 'sc_coexpression.R' 'sparsim_functions.R' 'zzz.R' RoxygenNote: 7.3.2 VignetteBuilder: knitr LinkingTo: cpp11, Rcpp Config/pak/sysreqs: cmake libglpk-dev make libbz2-dev libicu-dev liblzma-dev libpng-dev libuv1-dev libxml2-dev libssl-dev python3 xz-utils zlib1g-dev Repository: https://bioc.r-universe.dev Date/Publication: 2026-04-28 12:50:46 UTC RemoteUrl: https://github.com/bioc/MOSim RemoteRef: HEAD RemoteSha: 76f9819e904131dc41b557a19b25a5921dfcdd7a NeedsCompilation: yes Packaged: 2026-07-04 15:37:33 UTC; root Author: Carolina Monzó [aut], Carlos Martínez [aut], Sonia Tarazona [cre, aut] Maintainer: Sonia Tarazona