To cite MLSeq in publications use:

  Goksuluk D, Zararsiz G, Korkmaz S, Eldem V, Zararsiz GE, Ozcetin E,
  Ozturk A, Karaagaoglu AE. MLSeq: Machine learning interface for
  RNA-sequencing data. Computer Methods and Programs in Biomedicine.
  2019, 175:223-231.

A BibTeX entry for LaTeX users is

  @Article{,
    title = {MLSeq: Machine learning interface for RNA-sequencing data},
    author = {Dincer Goksuluk and Gokmen Zararsiz and Selcuk Korkmaz and Vahap Eldem and Gozde Erturk Zararsiz and Erdener Ozcetin and Ahmet Ozturk and Ahmet Ergun Karaagaoglu},
    journal = {Computer Methods and Programs in Biomedicine},
    year = {2019},
    volume = {175},
    pages = {223--231},
    url = {http://www.sciencedirect.com/science/article/pii/S0169260718318728},
    doi = {https://doi.org/10.1016/j.cmpb.2019.04.007},
  }