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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "MIRA" in publications use:'
type: software
license: GPL-3.0-only
title: 'MIRA: Methylation-Based Inference of Regulatory Activity'
version: 1.27.0
abstract: DNA methylation contains information about the regulatory state of the cell.
  MIRA aggregates genome-scale DNA methylation data into a DNA methylation profile
  for a given region set with shared biological annotation. Using this profile, MIRA
  infers and scores the collective regulatory activity for the region set. MIRA facilitates
  regulatory analysis in situations where classical regulatory assays would be difficult
  and allows public sources of region sets to be leveraged for novel insight into
  the regulatory state of DNA methylation datasets.
authors:
- family-names: Sheffield
  given-names: Nathan
- family-names: Lawson
  given-names: John
  email: jtl2hk@virginia.edu
preferred-citation:
  type: article
  title: 'MIRA: An R package for DNA methylation-based inference of regulatory activity'
  authors:
  - family-names: Lawson
    given-names: John T
  - family-names: Tomazou
    given-names: Eleni M
  - family-names: Bock
    given-names: Christoph
  - family-names: Sheffield
    given-names: Nathan C
  journal: Bioinformatics
  year: '2018'
  notes: R package version 1.27.0
  url: http://code.databio.org/MIRA
repository: https://bioc.r-universe.dev
repository-code: https://github.com/databio/MIRA
url: http://databio.org/mira
date-released: '2021-11-21'
contact:
- family-names: Lawson
  given-names: John
  email: jtl2hk@virginia.edu