NEWS
LRDE 1.1.1
- Initial Bioconductor submission of LRDE.
- Implements a hurdle negative binomial (Hurdle-NB) model for
differential expression analysis of long-read RNA-seq data.
- Includes:
- Data preparation (prepareDGE)
- Size factor estimation (sizeFactorsEst)
- Tag-wise dispersion estimation (tagwiseEst)
- Differential expression testing via:
* Likelihood Ratio Test (hurdle.LRT)
* Wald Test (hurdle.Wald.Test)
- Supports matrix, data.frame, and SummarizedExperiment inputs.