Version: 1.6.0
Text: Changed the name of the function "mt.rawp2adjp" to
        "mt.rawp2adjp.LPE" in order to avoid conflict with the original
        function from multtest library.

Version: 1.6.0
Text: Added the references to paired LPE - "LPEP library" and LPE for
        multiple conditions - "HEM library".

Version: 1.6.0
Text: Added an option "Bonferroni" in fdr.adjust.R to get Bonferroni
        adjusted p-values. (Though it is recommended to use FDR,
        Bonferroni adjusted method has been added here for users who
        want it.)

Version: 1.6.0
Text: Updated the document 'LPE.pdf' (hands on demonstration of LPE) in
        inst/doc. Changes summary:

Version: 1.3.0
Category: Updated the file am.trans.R for faster computations
Text:

Version: 1.2.0
Text: Created a project called "r-lpe" on sourceforge to get the most
        recent files. One can keep track of changes and checkout the
        latest version by anonymously checking out lpe from sf.net: cvs
        -z3 -d:pserver:anonymous@cvs.sourceforge.net:/cvsroot/r-lpe co
        -P LPE

Version: 1.2.0
Text: Bug fix in baseOlig.error.step1 and baseOlig.error.step2: For
        some data sets, adjacent quantile values were same due to
        thresholding/nature of the data - which caused the number of
        genes to be selected for var(M) caluclation as 0, and hence
        there was an error: "Error in var(x) : 'x' is empty".

Version: 1.2.0
Text: Added a check in baseOlig.error.step1 and baseOlig.error.step2 to
        see if min. value of variance does NOT go negative.

Version: 1.2.0
Text: Updated the email address. New address is:
        <nitin.jain@pfizer.com>

Version: 1.2.0
Text: Changed the default value of the parameter probe.set.name to
        NULL, so that if the GeneIDs are not provided, then rownames
        (1,2,3,...) are considered as GeneIDs.

Version: 1.2.0
Text: Changed the default argument of preprocess function 'lowess=TRUE'
        to FALSE. User should specify if they need lowess
        transformation.

Version: 1.2.0
Text: Added a reference (new published paper on "rank-invariant
        resampling for FDR calculations.

Version: 1.1.5
Text: More robust detection of outliers in two sample comparison.
        (Thanks to HyungJun Cho for the correction).

Version: 1.1.5
Text: Function lpe.R is broken in several small functions, easier to
        understand.

Version: 1.1.5
Text: Built under R 2.0.0