Package: LPE
Version: 1.87.0
Title: Methods for analyzing microarray data using Local Pooled Error
        (LPE) method
Author: Nitin Jain <emailnitinjain@gmail.com>, Michael O'Connell
        <michaelo@warath.com>, Jae K. Lee <jaeklee@virginia.edu>.
        Includes R source code contributed by HyungJun Cho
        <hcho@virginia.edu>
Maintainer: Nitin Jain <emailnitinjain@gmail.com>
Description: This LPE library is used to do significance analysis of
        microarray data with small number of replicates. It uses
        resampling based FDR adjustment, and gives less conservative
        results than traditional 'BH' or 'BY' procedures. Data accepted
        is raw data in txt format from MAS4, MAS5 or dChip. Data can
        also be supplied after normalization. LPE library is primarily
        used for analyzing data between two conditions. To use it for
        paired data, see LPEP library. For using LPE in multiple
        conditions, use HEM library.
Imports: stats
License: LGPL
URL: http://www.r-project.org,
        http://www.healthsystem.virginia.edu/internet/hes/biostat/bioinformatics/,
        http://sourceforge.net/projects/r-lpe/
Depends: R (>= 2.10)
biocViews: Microarray, DifferentialExpression
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:30:22 UTC
RemoteUrl: https://github.com/bioc/LPE
RemoteRef: HEAD
RemoteSha: 6513337d22163be8157c4c7e18b3594f3850b014
NeedsCompilation: no
Packaged: 2026-07-04 23:16:18 UTC; root