NEW FEATURES
o LACHESIS now allows de novo estimation of mutation rates from cohort data
o Inferred time axis updated
o Copy number segments with negative values are now filtered
NEW FEATURES
o Cumulative SNV densities at ECA and MRCA are now shown together
o Warnings in nbImport and plotSurvival were addressed by updating notation in ggplot
o A bug was corrected to allow inclusion of autosomes when using ACEseq as copy number caller
o Confidence bounds of the cumulative distribution are now plotted as shaded areas with opacity 0.3 to allow their distinction if they overlap
o Readme was updated to correct for spelling error.
o There's now a plotting modality for comparing individual disease trajectories (ECA, MRCA, age at diagnosis) across cohorts.
NEW FEATURES
o Update citation file.
NEW FEATURES
o Support mutational signatures with MutationalPatterns.
o Included unit tests.
NEW FEATURES
o First public release.