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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "Ibex" in publications use:'
type: software
license: MIT
title: 'Ibex: Methods for BCR single-cell embedding'
version: 1.3.1
doi: 10.32614/CRAN.package.Ibex
abstract: Implementation of the Ibex algorithm for single-cell embedding based on
  BCR sequences. The package includes a standalone function to encode BCR sequence
  information by amino acid properties or sequence order using tensorflow-based autoencoder.
  In addition, the package interacts with SingleCellExperiment or Seurat data objects.
authors:
- family-names: Borcherding
  given-names: Nick
  email: ncborch@gmail.com
repository: https://bioc.r-universe.dev
repository-code: https://github.com/BorchLab/Ibex
commit: e9edf776063f5b6eeedae67cdf0cd44381534868
url: https://github.com/BorchLab/Ibex/
date-released: '2026-05-29'
contact:
- family-names: Borcherding
  given-names: Nick
  email: ncborch@gmail.com