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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "INSPEcT" in publications use:'
type: software
license: GPL-2.0-only
title: 'INSPEcT: Modeling RNA synthesis, processing and degradation with RNA-seq data'
version: 1.35.0
doi: 10.1093/bioinformatics/btv288
abstract: INSPEcT (INference of Synthesis, Processing and dEgradation rates from Transcriptomic
  data) RNA-seq data in time-course experiments or steady-state conditions, with or
  without the support of nascent RNA data.
authors:
- family-names: Pretis
  given-names: Stefano
  name-particle: de
  email: ste.depo@gmail.com
preferred-citation:
  type: article
  title: 'INSPEcT: a Computational Tool to Infer mRNA Synthesis, Processing and Degradation
    Dynamics from RNA- and 4sU-seq Time Course Experiments.'
  authors:
  - family-names: Pretis
    given-names: Stefano
    name-particle: de
    email: ste.depo@gmail.com
  - family-names: Kress
    given-names: Theresia
  - family-names: Morelli
    given-names: Marco J
  - family-names: Melloni
    given-names: Giorgio EM
  - family-names: Riva
    given-names: Laura
  - family-names: Amati
    given-names: Bruno
  - family-names: Pelizzola
    given-names: Mattia
  year: '2015'
  journal: Bioinformatics
  doi: 10.1093/bioinformatics/btv288
repository: https://bioc.r-universe.dev
date-released: '2020-08-09'
contact:
- family-names: Pretis
  given-names: Stefano
  name-particle: de
  email: ste.depo@gmail.com
references:
- type: article
  title: Genome-wide dynamics of RNA synthesis, processing and degradation without
    RNA metabolic labeling.
  authors:
  - family-names: Pretis
    given-names: Stefano
    name-particle: de
  - family-names: Furlan
    given-names: Mattia
  - family-names: Pelizzola
    given-names: Mattia
  year: '2020'
  journal: Frontiers in Genetics
  doi: http://doi.org/10.3389/fgene.2020.00759
- type: article
  title: Genome-wide dynamics of RNA synthesis, processing and degradation without
    RNA metabolic labeling.
  authors:
  - family-names: Furlan
    given-names: Mattia
  - family-names: Galeota
    given-names: Eugenia
  - family-names: Gaudio
    given-names: Nunzio Del
  - family-names: Dassi
    given-names: Erik
  - family-names: Caselle
    given-names: Michele
  - family-names: Pretis
    given-names: Stefano
    name-particle: de
  - family-names: Pelizzola
    given-names: Mattia
  year: '2020'
  journal: Genome Research
  doi: http://doi.org/10.1101/gr.260984.120